PK04257.1 (Cannabis sativa)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 PK04257.1 T345100_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.948 0.468
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.946 0.454
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.946 0.454
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.946 0.426
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.946 0.426
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.946 0.426
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.893 0.355
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.886 0.369
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.886 0.369
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.874 0.326
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.844 0.326
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.839 0.319
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.839 0.319
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.837 0.284
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK04257.1 TCP 66 233

Links

Other TCP family TFs
Other Cannabis sativa TFs

420 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB04817.1 Alternaria brassicicola AB04817.1 I 0.000
ANIA_07513 Aspergillus nidulans CADANIAG00000615 D 0.000
AOL_s00215g64 Arthrobotrys oligospora AOL_s00215g64 I 0.000
ARB_05352 Arthroderma benhamiae ARB_05352 I 0.000
CCM_09377 Cordyceps militaris CCM_09377 I 0.000
COCC4DRAFT_173684 Bipolaris maydis COCC4DRAFT_173684 I 0.000
COCCADRAFT_4209 Bipolaris zeicola COCCADRAFT_4209 I 0.000
COCMIDRAFT_100501 Bipolaris oryzae COCMIDRAFT_100501 I 0.000
COCSADRAFT_250469 Bipolaris sorokiniana COCSADRAFT_250469 I 0.000
COCVIDRAFT_105819 Bipolaris victoriae COCVIDRAFT_105819 I 0.000
DRE_03900 Drechslerella stenobrocha DRE_03900 I 0.000
EPUS_04235 Endocarpon pusillum EPUS_04235 I 0.000
estExt_fgenesh3_pm.C_60520 Neurospora discreta estExt_fgenesh3_pm.C_60520 I 0.000
estExt_Genewise1Plus.C_130082 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_130082 I 0.000
EURHEDRAFT_405475 Aspergillus ruber EURHEDRAFT_405475 I 0.000
GGTG_00856 Gaeumannomyces graminis GGTG_00856 I 0.000
H072_4550 Dactylellina haptotyla H072_4550 I 0.000
H101_02345 Trichophyton interdigitale H101_02345 I 0.000
H102_05196 Trichophyton rubrum H102_05196 I 0.000
H105_05218 Trichophyton soudanense H105_05218 I 0.000
HCBG_05924 Histoplasma capsulatum HCBG_05924 I 0.000
HMPREF1541_05614 Cyphellophora europaea HMPREF1541_05614 I 0.000
LEMA_P070240.1 Leptosphaeria maculans LEMA_P070240.1 I 0.000
MGYG_07857 Microsporum gypseum MGYG_07857 I 0.000
NCU03905 Neurospora crassa NCU03905 D 0.000
NEUTE1DRAFT_88066 Neurospora tetrasperma NEUTE1DRAFT_88066 I 0.000
PAAG_01282 Paracoccidioides sp lutzii PAAG_01282 I 0.000
PABG_01850 Paracoccidioides brasiliensis PABG_01850 I 0.000
pap1 Schizosaccharomyces pombe SPAC1783.07c I 0.000
PDIP_47000 Penicillium digitatum PDIP_47000 I 0.000
PEX1_003570 Penicillium expansum PEX1_003570 I 0.000
PITC_017070 Penicillium italicum PITC_017070 I 0.000
PMAA_063050 Penicillium marneffei PMAA_063050 I 0.000
PMAA_063050 Talaromyces marneffei PMAA_063050 I 0.000
PTRG_01651 Pyrenophora triticirepentis PTRG_01651 I 0.000
PTT_06950 Pyrenophora teres PTT_06950 I 0.000
PV04_10908 Capronia semiimmersa PV04_10908 I 0.000
PVAR5_6135 Byssochlamys spectabilis PVAR5_6135 I 0.000
S40288_03027 Stachybotrys chartarum S40288_03027 I 0.000
SETTUDRAFT_18242 Setosphaeria turcica SETTUDRAFT_18242 I 0.000
SMAC_06328 Sordaria macrospora SMAC_06328 I 0.000
SOCG_04339 Schizosaccharomyces octosporus SOCG_04339 I 0.000
TEQG_02725 Trichophyton equinum TEQG_02725 I 0.000
TESG_06643 Trichophyton tonsurans TESG_06643 I 0.000
THITE_2109887 Thielavia terrestris THITE_2109887 I 0.000
TRV_04392 Trichophyton verrucosum TRV_04392 I 0.000
U727_0043143031 Penicillium solitum U727_0043143031 I 0.000
UCREL1_8518 Eutypa lata UCREL1_8518 I 0.000