PK12736.1 (Cannabis sativa)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 PK12736.1 T345104_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12736.1
M01315_2.00		 Cannabis sativa
NRRSCMYAYNNNNN
NNNNNRTRKGSYYN		 PBM
Lambert et al.(2019)
pTH10121		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP14
M07289_2.00 		Arabidopsis thaliana
AVADAKVDBGTGGGDCCCAC
GTGGGHCCCACVHBMTHTBT		 Dap-seq
OMalley et al.(2016)
TCP14_col_b 		0.975 0.563
TCP15
M00892_2.00 		Arabidopsis thaliana
NNGGNCCCAC
GTGGGNCCNN		 PBM
Franco-Zorrilla et al.(2014)
TCP15 		0.974 0.556
TCP15
M07277_2.00 		Arabidopsis thaliana
RTRGGDCCCACHH
DDGTGGGHCCYAY		 Dap-seq
OMalley et al.(2016)
At1g69690_col_a 		0.974 0.556
TCP15
M07278_2.00 		Arabidopsis thaliana
RTRGGNCCCACHW
WDGTGGGNCCYAY		 Dap-seq
OMalley et al.(2016)
At1g69690_colamp_a 		0.974 0.556
TCP15
M11394_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TCP15_01 		0.974 0.556
TCP8
M01311_2.00 		Arabidopsis thaliana
NGGNMCCAC
GTGGKNCCN		 PBM
Lambert et al.(2019)
pTH11569 		0.966 0.530
TCP22
M07279_2.00 		Arabidopsis thaliana
RTRGGNCCCACHN
NDGTGGGNCCYAY		 Dap-seq
OMalley et al.(2016)
At1g72010_colamp_a 		0.964 0.483
TCP22
M07280_2.00 		Arabidopsis thaliana
RTGGGDCCCACNN
NNGTGGGHCCCAY		 Dap-seq
OMalley et al.(2016)
At1g72010_col 		0.964 0.483
TCP23
M00891_2.00 		Arabidopsis thaliana
NNGGKCCCAC
GTGGGMCCNN		 PBM
Franco-Zorrilla et al.(2014)
TCP23 		0.960 0.497
VIT_15s0048g01150
M02515_2.00 		Vitis vinifera
NNGGNCCCAC
GTGGGNCCNN		 PBM
Weirauch et al.(2014)
pTH9294 		0.958 0.417
TCP9
M01086_2.00 		Arabidopsis thaliana
NNGGGCCCACN
NGTGGGCCCNN		 PBM
Sullivan et al.(2014)
pTH9796 		0.954 0.417
TCP9
M07281_2.00 		Arabidopsis thaliana
RTGGGDCCCAC
GTGGGHCCCAY		 Dap-seq
OMalley et al.(2016)
At2g45680_colamp_a 		0.954 0.417
TCP9
M07282_2.00 		Arabidopsis thaliana
DGTGGGRCCCACDDNDNDNBN
NVNHNHNHHGTGGGYCCCACH		 Dap-seq
OMalley et al.(2016)
At2g45680_col_b 		0.954 0.417
LjSGA_053525.1
M02518_2.00 		Lotus japonicus
GGNCCCAC
GTGGGNCC		 PBM
Weirauch et al.(2014)
pTH9201 		0.954 0.404
GLYMA19G26560
M02511_2.00 		Glycine max
BGGBCCCAC
GTGGGVCCV		 PBM
Weirauch et al.(2014)
pTH9184 		0.954 0.430
PK13314.1
M01316_2.00 		Cannabis sativa
NNGGNCCCAC
GTGGGNCCNN		 PBM
Lambert et al.(2019)
pTH11330 		0.953 0.424
cassava45561.m1
M02516_2.00 		Manihot esculenta
KGGVCCCACH
DGTGGGBCCM		 PBM
Weirauch et al.(2014)
pTH9207 		0.953 0.424
TCP19
M02504_2.00 		Arabidopsis thaliana
NNGGVCCCAC
GTGGGBCCNN		 PBM
Weirauch et al.(2014)
pTH7452 		0.952 0.391
PK14653.1
M01317_2.00 		Cannabis sativa
BGGSCCCAC
GTGGGSCCV		 PBM
Lambert et al.(2019)
pTH11324 		0.951 0.391
PK14653.1
M02517_2.00 		Cannabis sativa
BTGGGCCCAV
BTGGGCCCAV		 PBM
Weirauch et al.(2014)
pTH9586 		0.951 0.391
TCP7
M07294_2.00 		Arabidopsis thaliana
RTGGGNCCCAC
GTGGGNCCCAY		 Dap-seq
OMalley et al.(2016)
TCP7_col_a 		0.950 0.404
AT-TCP20
M02507_2.00 		Arabidopsis lyrata
GRSCCCAC
GTGGGSYC		 PBM
Weirauch et al.(2014)
pTH9229 		0.950 0.391
PCF2
M11399_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF2_01 		0.950 0.391
TCP20
M02502_2.00 		Arabidopsis thaliana
GGSCCCACNN
NNGTGGGSCC		 PBM
Weirauch et al.(2014)
pTH8159 		0.950 0.384
TCP20
M07285_2.00 		Arabidopsis thaliana
NNNNNNNNNNGTGGGRCCCAC
GTGGGYCCCACNNNNNNNNNN		 Dap-seq
OMalley et al.(2016)
TCP20_col_a 		0.950 0.384
TCP20
M07286_2.00 		Arabidopsis thaliana
RTGGGDCCCACH
DGTGGGHCCCAY		 Dap-seq
OMalley et al.(2016)
TCP20_colamp_a 		0.950 0.384
TCP20
M11397_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TCP20_01 		0.950 0.384
fgenesh2_kg.8__1074__AT5G51910.2
M02509_2.00 		Arabidopsis lyrata
GRSCCCAC
GTGGGSYC		 PBM
Weirauch et al.(2014)
pTH9232 		0.950 0.391
TCP21
M07292_2.00 		Arabidopsis thaliana
NNRTGGGDCCCACN
NGTGGGHCCCAYNN		 Dap-seq
OMalley et al.(2016)
At5g08330_col_a 		0.948 0.391
TCP21
M07293_2.00 		Arabidopsis thaliana
RTRGGDCCCACH
DGTGGGHCCYAY		 Dap-seq
OMalley et al.(2016)
At5g08330_colamp_a 		0.948 0.391
OsI_08196
M02513_2.00 		Oryza sativa
GGGCCCAC
GTGGGCCC		 PBM
Weirauch et al.(2014)
pTH9274 		0.942 0.364
OS02G0635800
M02512_2.00 		Oryza sativa
NBGGGCCCVN
NBGGGCCCVN		 PBM
Weirauch et al.(2014)
pTH8856 		0.942 0.358
TCP11
M11395_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TCP11_01 		0.897 0.404
TCP11
M11396_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TCP11_02 		0.897 0.404
For this family, TFs with SR scores > 0.822 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01315_2.00 TCP 56 255

DNA Binding Domains

Protein ID Domain From To Sequence
PK12736.1 TCP 92 291

Links

Other TCP family TFs
Other Cannabis sativa TFs

659 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R005355 Calypte anna Aan_R005355 I
Afo_R005854 Aptenodytes forsteri Afo_R005854 I
Alligator_sinensis_CCG006333.1 Alligator sinensis Alligator_sinensis_CCG006333.1 I
ENSAMEG00000020014 Ailuropoda melanoleuca ENSAMEG00000020014 I
ENSAPLG00000011548 Anas platyrhynchos ENSAPLG00000011548 I
ENSCSAG00000017588 Chlorocebus sabaeus ENSCSAG00000017588 I
ENSDORG00000015193 Dipodomys ordii ENSDORG00000015193 I
ENSFALG00000006322 Ficedula albicollis ENSFALG00000006322 I
ENSGALG00000014771 Gallus gallus ENSGALG00000014771 I
ENSLACG00000011224 Latimeria chalumnae ENSLACG00000011224 I
ENSMEUG00000012751 Macropus eugenii ENSMEUG00000012751 I
ENSMPUG00000004990 Mustela putorius furo ENSMPUG00000004990 I
ENSNLEG00000006918 Nomascus leucogenys ENSNLEG00000006918 I
ENSP00000349503 Macaca fascicularis ENSP00000349503 I
ENSP00000349503-D1 Bos grunniens ENSP00000349503-D1 I
ENSPANG00000003128 Papio anubis ENSPANG00000003128 I
ENSPSIG00000005537 Pelodiscus sinensis ENSPSIG00000005537 I
ENSSTOG00000010216 Ictidomys tridecemlineatus ENSSTOG00000010216 I
Gfo_R012109 Geospiza fortis Gfo_R012109 I
Ogr15623 Ophisaurus gracilis Ogr15623 I
Pvit_14008 Pogona vitticeps Pvit_14008 I
Tal_R006431 Tyto alba Tal_R006431 I
zbtb14 Xenopus tropicalis XB-GENE-968315 I
ZBTB14 Anolis carolinensis ENSACAG00000009653 I
ZBTB14 Tupaia belangeri ENSTBEG00000017107 I
ZBTB14 Pteropus vampyrus ENSPVAG00000012683 I
ZBTB14 Pan troglodytes ENSPTRG00000029352 I
ZBTB14 Procavia capensis ENSPCAG00000008601 I
ZBTB14 Gorilla gorilla ENSGGOG00000024397 I
ZBTB14 Bos taurus ENSBTAG00000038970 I
ZBTB14 Canis familiaris ENSCAFG00000018554 I
ZBTB14 Choloepus hoffmanni ENSCHOG00000012883 I
ZBTB14 Callithrix jacchus ENSCJAG00000037461 I
ZBTB14 Equus caballus ENSECAG00000019218 I
ZBTB14 Echinops telfairi ENSETEG00000004337 I
ZBTB14 Felis catus ENSFCAG00000023573 I
ZBTB14 Homo sapiens ENSG00000198081 D
ZBTB14 Otolemur garnettii ENSOGAG00000009683 I
ZBTB14 Meleagris gallopavo ENSMGAG00000015827 I
ZBTB14 Macaca mulatta ENSMMUG00000022005 I
ZBTB14 Monodelphis domestica ENSMODG00000021460 I
Zbtb14 Mus musculus ENSMUSG00000049672 D
ZBTB14 Ornithorhynchus anatinus ENSOANG00000005381 I
ZBTB14 Oryctolagus cuniculus ENSOCUG00000004131 I
Zfp161 Rattus norvegicus ENSRNOG00000016719 I