CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSONIG00000015402 *(Oreochromis niloticus)* TCR/CxC
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03638 (TCR)	IPR005172	ENSONIG00000015402	T345313_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
lin54 M02526_2.00	Danio rerio	NHTYRAAH	DTTYRADN	PBM Weirauch et al.(2014) pTH8399	0.672	0.947
LIN54 M02527_2.00	Gallus gallus	NRTTYAAAH	DTTTRAAYN	PBM Weirauch et al.(2014) pTH8566	0.672	0.947
ENSTSYG00000005291 M02528_2.00	Tarsius syrichta	NNWDHDHWNN	NNWDHDHWNN	PBM Weirauch et al.(2014) pTH9366	0.672	0.907
SPU_025306 M02531_2.00	Strongylocentrotus purpuratus	NNNNWYRAAH	DTTYRWNNNN	PBM Weirauch et al.(2014) pTH9286	0.672	0.907
NEMVEDRAFT_v1g111410 M01320_2.00	Nematostella vectensis	NNNNYRWRN	NYWYRNNNN	PBM Lambert et al.(2019) pTH9771	0.672	0.853
BGIBMGA008956 M02524_2.00	Bombyx mori	AATTTAAAW	WTTTAAATT	PBM Weirauch et al.(2014) pTH9238	0.672	0.840
GE12548 M02529_2.00	Drosophila yakuba	DTTYAAAY	RTTTRAAH	PBM Weirauch et al.(2014) pTH9262	0.672	0.827
XP_002124866.1 M01321_2.00	Ciona intestinalis	NDTTYRAAN	NTTYRAAHN	PBM Lambert et al.(2019) pTH9835	0.672	0.827
fgeneshCV_pg.C_scaffold_18000164 M02534_2.00	Chlorella vulgaris	NNNNDYRAAH	DTTYRHNNNN	PBM Weirauch et al.(2014) pTH9252	0.672	0.680
AT2G20110 M02520_2.00	Arabidopsis thaliana	DTTTAAAH	DTTTAAAH	PBM Weirauch et al.(2014) pTH7914	0.672	0.667
TCX5 M02523_2.00	Arabidopsis thaliana	NRTTCAAAYN	NRTTTGAAYN	PBM Weirauch et al.(2014) pTH8164	0.672	0.667
AT5G25790 M01319_2.00	Arabidopsis thaliana	NHYRAAHN	NDTTYRDN	PBM Lambert et al.(2019) pTH11533	0.672	0.667
AT2G20110 M07295_2.00	Arabidopsis thaliana	WWHWAADATTYAAAW	WTTTRAATHTTWDWW	Dap-seq OMalley et al.(2016) AT2G20110_col_a	0.672	0.667
AT2G20110 M07296_2.00	Arabidopsis thaliana	WWHNAAATTYAAAHN	NDTTTRAATTTNDWW	Dap-seq OMalley et al.(2016) AT2G20110_colamp_a	0.672	0.667
TCX3 M01087_2.00	Arabidopsis thaliana	NNDTTYAAAH	DTTTRAAHNN	PBM Sullivan et al.(2014) pTH7218	0.672	0.600
TCX3 M02522_2.00	Arabidopsis thaliana	WTTYAAAH	DTTTRAAW	PBM Weirauch et al.(2014) pTH7421	0.672	0.600
fgenesh1_pg.C_Chr_09.0001000301 M02533_2.00	Ostreococcus tauri	NNNNNRHNN	NNDYNNNNN	PBM Weirauch et al.(2014) pTH9457	0.672	0.600
TCX3 M07297_2.00	Arabidopsis thaliana	DWTTYRAAWTTBAAW	WTTVAAATTYRAAWH	Dap-seq OMalley et al.(2016) SOL1_colamp_a	0.672	0.600
TCX3 M07298_2.00	Arabidopsis thaliana	WTWWAAAATTYAAAW	WTTTRAATTTTWWAW	Dap-seq OMalley et al.(2016) SOL1_col	0.672	0.600
TCX4 M02521_2.00	Arabidopsis thaliana	DWTTYRAAWH	DWTTYRAAWH	PBM Weirauch et al.(2014) pTH7573	0.672	0.587
TCX2 M07300_2.00	Arabidopsis thaliana	WWTYVAAATTYRAAW	WTTYRAATTTBRAWW	Dap-seq OMalley et al.(2016) TCX2_col_a	0.672	0.587
TCX2 M07301_2.00	Arabidopsis thaliana	TTYVAAATTYRAAW	WTTYRAATTTBRAA	Dap-seq OMalley et al.(2016) TCX2_colamp_a	0.672	0.587
PK22848.1 M02532_2.00	Cannabis sativa	NNNYNAAATTTNN	NNAAATTTNRNNN	PBM Weirauch et al.(2014) pTH9724	0.672	0.573
BRADI1G55710 M02525_2.00	Brachypodium distachyon	NVTBYRVABN	NVTBYRVABN	PBM Weirauch et al.(2014) pTH9241	0.672	0.560
TSO1 M07299_2.00	Arabidopsis thaliana	WWWTWDAAATTYAAA	TTTRAATTTHWAWWW	Dap-seq OMalley et al.(2016) TSO1_col_a	0.672	0.560
GSPATT00010696001 M02530_2.00	Paramecium tetraurelia	NNBRAAHN	NDTTYVNN	PBM Weirauch et al.(2014) pTH8720	0.672	0.547
PK27683.1 M01322_2.00	Cannabis sativa	NDTTYAAAH	DTTTRAAHN	PBM Lambert et al.(2019) pTH11347	0.672	0.547
gw1.20.00.89.1 M02535_2.00	Ostreococcus tauri	WNYWBVWRNW	WNYWBVWRNW	PBM Weirauch et al.(2014) pTH9647	0.672	0.547
For this family, TFs with SR scores > 0.660* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSONIP00000019377	TCR/CxC	578	614	RKPCNCTKSQCLKLYCDCFANGEFCNNCNCNNCFNNL
ENSONIP00000019377	TCR/CxC	652	689	SKGCNCKRSGCLKNYCECYEAKIMCSSICKCIGCKNFE
ENSONIP00000019378	TCR/CxC	489	525	RKPCNCTKSQCLKLYCDCFANGEFCNNCNCNNCFNNL
ENSONIP00000019378	TCR/CxC	563	600	SKGCNCKRSGCLKNYCECYEAKIMCSSICKCIGCKNFE

Links
Other TCR/CxC family TFs
Other *Oreochromis niloticus* TFs

1214 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ENSBTAP00000046628-D1	Bos grunniens	ENSBTAP00000046628-D1	N
ENSCJAG00000033914	Callithrix jacchus	ENSCJAG00000033914	I
ENSCSAG00000010784	Chlorocebus sabaeus	ENSCSAG00000010784	N
ENSDORG00000006822	Dipodomys ordii	ENSDORG00000006822	N
ENSEEUG00000004133	Erinaceus europaeus	ENSEEUG00000004133	N
ENSEEUG00000014393	Erinaceus europaeus	ENSEEUG00000014393	N
ENSMEUG00000000171	Macropus eugenii	ENSMEUG00000000171	N
ENSMLUG00000014832	Myotis lucifugus	ENSMLUG00000014832	N
ENSMPUG00000015689	Mustela putorius furo	ENSMPUG00000015689	N
ENSNLEG00000014756	Nomascus leucogenys	ENSNLEG00000014756	N
ENSOARG00000011793	Ovis aries	ENSOARG00000011793	N
ENSP00000356849	Macaca fascicularis	ENSP00000356849	N
ENSPANG00000013790	Papio anubis	ENSPANG00000013790	N
ENSPPYG00000000558	Pongo abelii	ENSPPYG00000000558	N
ENSSHAG00000018112	Sarcophilus harrisii	ENSSHAG00000018112	N
ENSSTOG00000025009	Ictidomys tridecemlineatus	ENSSTOG00000025009	N
ENSTSYG00000011078	Tarsius syrichta	ENSTSYG00000011078	N
Myotis_brandtii_POGK_10024358	Myotis brandtii	Myotis_brandtii_POGK_10024358	N
POGK	Pan troglodytes	ENSPTRG00000001626	N
POGK	Bos taurus	ENSBTAG00000010775	N
POGK	Canis familiaris	ENSCAFG00000015613	N
POGK	Choloepus hoffmanni	ENSCHOG00000003466	N
POGK	Tursiops truncatus	ENSTTRG00000015778	N
POGK	Cavia porcellus	ENSCPOG00000026820	N
POGK	Tupaia belangeri	ENSTBEG00000012681	N
POGK	Dasypus novemcinctus	ENSDNOG00000035171	N
POGK	Sus scrofa	ENSSSCG00000006319	N
POGK	Equus caballus	ENSECAG00000003013	N
Pogk	Rattus norvegicus	ENSRNOG00000032058	N
POGK	Pteropus vampyrus	ENSPVAG00000014118	N
POGK	Microcebus murinus	ENSMICG00000011758	N
POGK	Echinops telfairi	ENSETEG00000010593	N
POGK	Procavia capensis	ENSPCAG00000003826	N
POGK	Felis catus	ENSFCAG00000010534	N
POGK	Ochotona princeps	ENSOPRG00000010382	N
POGK	Oryctolagus cuniculus	ENSOCUG00000028218	N
POGK	Homo sapiens	ENSG00000143157	I
POGK	Gorilla gorilla	ENSGGOG00000008163	N
Pogk	Mus musculus	ENSMUSG00000040596	N
POGK	Loxodonta africana	ENSLAFG00000009761	N
POGK	Monodelphis domestica	ENSMODG00000001618	N
POGK	Macaca mulatta	ENSMMUG00000017789	N

ENSONIG00000015402 (Oreochromis niloticus) TCR/CxC

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1214 Related TFs

ENSONIG00000015402 **(Oreochromis niloticus)
TCR/CxC**