CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GSPATT00018525001 *(Paramecium tetraurelia)* TCR/CxC
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03638 (TCR)	IPR005172	GSPATT00018525001	T345472_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
TCX4 M02521_2.00	Arabidopsis thaliana	DWTTYRAAWH	DWTTYRAAWH	PBM Weirauch et al.(2014) pTH7573	0.672	0.513
AT5G25790 M01319_2.00	Arabidopsis thaliana	NHYRAAHN	NDTTYRDN	PBM Lambert et al.(2019) pTH11533	0.672	0.500
fgenesh1_pg.C_Chr_09.0001000301 M02533_2.00	Ostreococcus tauri	NNNNNRHNN	NNDYNNNNN	PBM Weirauch et al.(2014) pTH9457	0.672	0.500
TCX3 M01087_2.00	Arabidopsis thaliana	NNDTTYAAAH	DTTTRAAHNN	PBM Sullivan et al.(2014) pTH7218	0.672	0.487
TCX3 M02522_2.00	Arabidopsis thaliana	WTTYAAAH	DTTTRAAW	PBM Weirauch et al.(2014) pTH7421	0.672	0.487
BRADI1G55710 M02525_2.00	Brachypodium distachyon	NVTBYRVABN	NVTBYRVABN	PBM Weirauch et al.(2014) pTH9241	0.672	0.487
PK22848.1 M02532_2.00	Cannabis sativa	NNNYNAAATTTNN	NNAAATTTNRNNN	PBM Weirauch et al.(2014) pTH9724	0.672	0.487
TCX3 M07297_2.00	Arabidopsis thaliana	DWTTYRAAWTTBAAW	WTTVAAATTYRAAWH	Dap-seq OMalley et al.(2016) SOL1_colamp_a	0.672	0.487
TCX3 M07298_2.00	Arabidopsis thaliana	WTWWAAAATTYAAAW	WTTTRAATTTTWWAW	Dap-seq OMalley et al.(2016) SOL1_col	0.672	0.487
TCX2 M07300_2.00	Arabidopsis thaliana	WWTYVAAATTYRAAW	WTTYRAATTTBRAWW	Dap-seq OMalley et al.(2016) TCX2_col_a	0.672	0.474
TCX2 M07301_2.00	Arabidopsis thaliana	TTYVAAATTYRAAW	WTTYRAATTTBRAA	Dap-seq OMalley et al.(2016) TCX2_colamp_a	0.672	0.474
AT2G20110 M02520_2.00	Arabidopsis thaliana	DTTTAAAH	DTTTAAAH	PBM Weirauch et al.(2014) pTH7914	0.672	0.461
TCX5 M02523_2.00	Arabidopsis thaliana	NRTTCAAAYN	NRTTTGAAYN	PBM Weirauch et al.(2014) pTH8164	0.672	0.461
fgeneshCV_pg.C_scaffold_18000164 M02534_2.00	Chlorella vulgaris	NNNNDYRAAH	DTTYRHNNNN	PBM Weirauch et al.(2014) pTH9252	0.672	0.461
AT2G20110 M07295_2.00	Arabidopsis thaliana	WWHWAADATTYAAAW	WTTTRAATHTTWDWW	Dap-seq OMalley et al.(2016) AT2G20110_col_a	0.672	0.461
AT2G20110 M07296_2.00	Arabidopsis thaliana	WWHNAAATTYAAAHN	NDTTTRAATTTNDWW	Dap-seq OMalley et al.(2016) AT2G20110_colamp_a	0.672	0.461
TSO1 M07299_2.00	Arabidopsis thaliana	WWWTWDAAATTYAAA	TTTRAATTTHWAWWW	Dap-seq OMalley et al.(2016) TSO1_col_a	0.672	0.461
gw1.20.00.89.1 M02535_2.00	Ostreococcus tauri	WNYWBVWRNW	WNYWBVWRNW	PBM Weirauch et al.(2014) pTH9647	0.672	0.447
lin54 M02526_2.00	Danio rerio	NHTYRAAH	DTTYRADN	PBM Weirauch et al.(2014) pTH8399	0.672	0.434
LIN54 M02527_2.00	Gallus gallus	NRTTYAAAH	DTTTRAAYN	PBM Weirauch et al.(2014) pTH8566	0.672	0.434
NEMVEDRAFT_v1g111410 M01320_2.00	Nematostella vectensis	NNNNYRWRN	NYWYRNNNN	PBM Lambert et al.(2019) pTH9771	0.672	0.434
SPU_025306 M02531_2.00	Strongylocentrotus purpuratus	NNNNWYRAAH	DTTYRWNNNN	PBM Weirauch et al.(2014) pTH9286	0.672	0.434
XP_002124866.1 M01321_2.00	Ciona intestinalis	NDTTYRAAN	NTTYRAAHN	PBM Lambert et al.(2019) pTH9835	0.672	0.434
BGIBMGA008956 M02524_2.00	Bombyx mori	AATTTAAAW	WTTTAAATT	PBM Weirauch et al.(2014) pTH9238	0.672	0.421
GE12548 M02529_2.00	Drosophila yakuba	DTTYAAAY	RTTTRAAH	PBM Weirauch et al.(2014) pTH9262	0.672	0.421
GSPATT00010696001 M02530_2.00	Paramecium tetraurelia	NNBRAAHN	NDTTYVNN	PBM Weirauch et al.(2014) pTH8720	0.672	0.421
ENSTSYG00000005291 M02528_2.00	Tarsius syrichta	NNWDHDHWNN	NNWDHDHWNN	PBM Weirauch et al.(2014) pTH9366	0.672	0.408
PK27683.1 M01322_2.00	Cannabis sativa	NDTTYAAAH	DTTTRAAHN	PBM Lambert et al.(2019) pTH11347	0.672	0.382
For this family, TFs with SR scores > 0.660* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
CAK84321	TCR/CxC	94	131	QIKCQCNKSQCQQSYCECFARGKTCGKHCGCQNCQNKQ
CAK84321	TCR/CxC	157	194	LKGCTCGKSKCQNKFCSCHQDGKYCNSGCRCVDCKNKY

Links
Other TCR/CxC family TFs
Other *Paramecium tetraurelia* TFs

1213 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
AGABI2DRAFT_123058	Agaricus bisporus	AGABI2DRAFT_123058	N
CC1G_09257	Coprinopsis cinerea	CC1G_09257	N
CERSUDRAFT_117900	Ceriporiopsis subvermispora	CERSUDRAFT_117900	N
CY34DRAFT_800104	Suillus luteus	CY34DRAFT_800104	N
FOMPIDRAFT_1112959	Fomitopsis pinicola	FOMPIDRAFT_1112959	N
GALMADRAFT_1133694	Galerina marginata	GALMADRAFT_1133694	N
GYMLUDRAFT_228507	Gymnopus luxurians	GYMLUDRAFT_228507	N
JAAARDRAFT_323836	Jaapia argillacea	JAAARDRAFT_323836	N
K443DRAFT_131780	Laccaria amethystina	K443DRAFT_131780	N
M378DRAFT_308661	Amanita muscaria	M378DRAFT_308661	N
M404DRAFT_259997	Pisolithus tinctorius	M404DRAFT_259997	N
M408DRAFT_21575	Serendipita vermifera	M408DRAFT_21575	N
M408DRAFT_261453	Serendipita vermifera	M408DRAFT_261453	N
M408DRAFT_261718	Serendipita vermifera	M408DRAFT_261718	N
M408DRAFT_267566	Serendipita vermifera	M408DRAFT_267566	N
M408DRAFT_327725	Serendipita vermifera	M408DRAFT_327725	N
M413DRAFT_17514	Hebeloma cylindrosporum	M413DRAFT_17514	N
Moror_9779	Moniliophthora roreri	Moror_9779	N
PAXRUDRAFT_822813	Paxillus rubicundulus	PAXRUDRAFT_822813	N
PHACADRAFT_258850	Phanerochaete carnosa	PHACADRAFT_258850	N
PHLGIDRAFT_126340	Phlebiopsis gigantea	PHLGIDRAFT_126340	N
PISMIDRAFT_8021	Pisolithus microcarpus	PISMIDRAFT_8021	N
PLEOSDRAFT_1076525	Pleurotus ostreatus	PLEOSDRAFT_1076525	N
POSPLDRAFT_92548	Postia placenta	POSPLDRAFT_92548	N
SCLCIDRAFT_1208179	Scleroderma citrinum	SCLCIDRAFT_1208179	N

GSPATT00018525001 (Paramecium tetraurelia) TCR/CxC

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1213 Related TFs

GSPATT00018525001 **(Paramecium tetraurelia)
TCR/CxC**