OBART12G18270 (Oryza barthii)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03638 (TCR) IPR005172 OBART12G18270 T345599_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BRADI1G55710
M02525_2.00 		Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN		 PBM
Weirauch et al.(2014)
pTH9241 		0.672 0.845
PK22848.1
M02532_2.00 		Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9724 		0.672 0.810
TCX2
M07300_2.00 		Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW		 Dap-seq
OMalley et al.(2016)
TCX2_col_a 		0.672 0.810
TCX2
M07301_2.00 		Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA		 Dap-seq
OMalley et al.(2016)
TCX2_colamp_a 		0.672 0.810
TCX3
M01087_2.00 		Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN		 PBM
Sullivan et al.(2014)
pTH7218 		0.672 0.793
TCX3
M02522_2.00 		Arabidopsis thaliana
WTTYAAAH
DTTTRAAW		 PBM
Weirauch et al.(2014)
pTH7421 		0.672 0.793
TCX3
M07297_2.00 		Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH		 Dap-seq
OMalley et al.(2016)
SOL1_colamp_a 		0.672 0.793
TCX3
M07298_2.00 		Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW		 Dap-seq
OMalley et al.(2016)
SOL1_col 		0.672 0.793
TSO1
M07299_2.00 		Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW		 Dap-seq
OMalley et al.(2016)
TSO1_col_a 		0.672 0.776
TCX4
M02521_2.00 		Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH		 PBM
Weirauch et al.(2014)
pTH7573 		0.672 0.741
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00 		Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN		 PBM
Weirauch et al.(2014)
pTH9457 		0.672 0.603
AT5G25790
M01319_2.00 		Arabidopsis thaliana
NHYRAAHN
NDTTYRDN		 PBM
Lambert et al.(2019)
pTH11533 		0.672 0.517
SPU_025306
M02531_2.00 		Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN		 PBM
Weirauch et al.(2014)
pTH9286 		0.672 0.500
PK27683.1
M01322_2.00 		Cannabis sativa
NDTTYAAAH
DTTTRAAHN		 PBM
Lambert et al.(2019)
pTH11347 		0.672 0.500
LIN54
M02527_2.00 		Gallus gallus
NRTTYAAAH
DTTTRAAYN		 PBM
Weirauch et al.(2014)
pTH8566 		0.672 0.483
ENSTSYG00000005291
M02528_2.00 		Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN		 PBM
Weirauch et al.(2014)
pTH9366 		0.672 0.483
NEMVEDRAFT_v1g111410
M01320_2.00 		Nematostella vectensis
NNNNYRWRN
NYWYRNNNN		 PBM
Lambert et al.(2019)
pTH9771 		0.672 0.483
XP_002124866.1
M01321_2.00 		Ciona intestinalis
NDTTYRAAN
NTTYRAAHN		 PBM
Lambert et al.(2019)
pTH9835 		0.672 0.483
AT2G20110
M02520_2.00 		Arabidopsis thaliana
DTTTAAAH
DTTTAAAH		 PBM
Weirauch et al.(2014)
pTH7914 		0.672 0.466
TCX5
M02523_2.00 		Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN		 PBM
Weirauch et al.(2014)
pTH8164 		0.672 0.466
lin54
M02526_2.00 		Danio rerio
NHTYRAAH
DTTYRADN		 PBM
Weirauch et al.(2014)
pTH8399 		0.672 0.466
GSPATT00010696001
M02530_2.00 		Paramecium tetraurelia
NNBRAAHN
NDTTYVNN		 PBM
Weirauch et al.(2014)
pTH8720 		0.672 0.466
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00 		Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN		 PBM
Weirauch et al.(2014)
pTH9252 		0.672 0.466
AT2G20110
M07295_2.00 		Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_col_a 		0.672 0.466
AT2G20110
M07296_2.00 		Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a 		0.672 0.466
BGIBMGA008956
M02524_2.00 		Bombyx mori
AATTTAAAW
WTTTAAATT		 PBM
Weirauch et al.(2014)
pTH9238 		0.672 0.448
GE12548
M02529_2.00 		Drosophila yakuba
DTTYAAAY
RTTTRAAH		 PBM
Weirauch et al.(2014)
pTH9262 		0.672 0.448
gw1.20.00.89.1
M02535_2.00 		Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW		 PBM
Weirauch et al.(2014)
pTH9647 		0.672 0.448
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART12G18270.1 TCR/CxC 461 498
OBART12G18270.1 TCR/CxC 532 551

Links

Other TCR/CxC family TFs
Other Oryza barthii TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_07971 Capronia coronata A1O1_07971 I
A1O5_13042 Cladophialophora psammophila A1O5_13042 I
A1O9_08621 Exophiala aquamarina A1O9_08621 I
AB07238.1 Alternaria brassicicola AB07238.1 I
ACLA_049990 Aspergillus clavatus CADACLAG00004890 I
AFUA_3G06170 Aspergillus fumigatus CADAFUAG00005478 I
AFUA_4G10820 Aspergillus fumigatus CADAFUAG00008327 I
ANIA_01962 Aspergillus nidulans CADANIAG00008622 I
ATEG_03987 Aspergillus terreus CADATEAG00009198 I
AUEXF2481DRAFT_37338 Aureobasidium subglaciale AUEXF2481DRAFT_37338 I
BBA_05443 Beauveria bassiana BBA_05443 I
BGHDH14_bgh03211 Blumeria graminis BGHDH14_bgh03211 I
BOTBODRAFT_99971 Botryobasidium botryosum BOTBODRAFT_99971 N
CADAFLAG00002060 Aspergillus flavus CADAFLAG00002060 I
CADANGAG00004297 Aspergillus niger CADANGAG00004297 I
CC1G_07392 Coprinopsis cinerea CC1G_07392 N
CCM_04586 Cordyceps militaris CCM_04586 I
CFIO01_09392 Colletotrichum fioriniae CFIO01_09392 I
CGGC5_3189 Colletotrichum gloeosporioides CGGC5_3189 I
CH063_09403 Colletotrichum higginsianum CH063_09403 I
CHGG_03580 Chaetomium globosum CHGG_03580 N
CHGG_08188 Chaetomium globosum CHGG_08188 I
CIMG_00406 Coccidioides immitis CIMG_00406 I
CMQ_5376 Grosmannia clavigera CMQ_5376 I
Cob_13096 Colletotrichum orbiculare Cob_13096 N
COCC4DRAFT_168040 Bipolaris maydis COCC4DRAFT_168040 I
COCCADRAFT_38231 Bipolaris zeicola COCCADRAFT_38231 I
COCMIDRAFT_87821 Bipolaris oryzae COCMIDRAFT_87821 I
COCSADRAFT_171253 Bipolaris sorokiniana COCSADRAFT_171253 I
COCVIDRAFT_34603 Bipolaris victoriae COCVIDRAFT_34603 I
CPC735_058040 Coccidioides posadasii CPC735_058040 I
CPUR_06949 Claviceps purpurea CPUR_06949 I
CSUB01_02050 Colletotrichum sublineola CSUB01_02050 I
CTHT_0001070 Chaetomium thermophilum CTHT_0001070 N
CTHT_0006830 Chaetomium thermophilum CTHT_0006830 I
EPUS_03386 Endocarpon pusillum EPUS_03386 I
EPUS_08057 Endocarpon pusillum EPUS_08057 I
estExt_fgenesh1_pg.C_10913 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_10913 I
EURHEDRAFT_373724 Aspergillus ruber EURHEDRAFT_373724 I
EURHEDRAFT_401871 Aspergillus ruber EURHEDRAFT_401871 I
F503_03625 Ophiostoma piceae uamh F503_03625 I
F503_06490 Ophiostoma piceae uamh F503_06490 I
FFUJ_05685 Fusarium fujikuroi FFUJ_05685 I
FFUJ_13386 Fusarium fujikuroi FFUJ_13386 I
fgenesh1_pm.00609_#_235 Aspergillus carbonarius fgenesh1_pm.00609_#_235 I
fgeneshN1_pm.sca_3_chr4_2_0000013 Nectria haematococca fgeneshN1_pm.sca_3_chr4_2_0000013 I
FGRRES_05151 Fusarium graminearum FGRRES_05151 I
FGRRES_08893 Fusarium graminearum FGRRES_08893 I
FOXG_07900 Fusarium oxysporum FOXG_07900 I
FPSE_06551 Fusarium pseudograminearum FPSE_06551 I
FVEG_04822 Fusarium verticillioides FVEG_04822 I
Genemark.3077_g Heterobasidion annosum Genemark.3077_g N
GGTG_04596 Gaeumannomyces graminis GGTG_04596 I
GGTG_04697 Gaeumannomyces graminis GGTG_04697 I
GLOINDRAFT_25061 Rhizophagus irregularis GLOINDRAFT_25061 I
GLOINDRAFT_44046 Rhizophagus irregularis GLOINDRAFT_44046 I
GLOINDRAFT_50485 Rhizophagus irregularis GLOINDRAFT_50485 I
GLOINDRAFT_60750 Rhizophagus irregularis GLOINDRAFT_60750 I
GLOINDRAFT_81724 Rhizophagus irregularis GLOINDRAFT_81724 I
GLOTRDRAFT_38143 Gloeophyllum trabeum GLOTRDRAFT_38143 I
GLRG_04643 Colletotrichum graminicola GLRG_04643 I
GMDG_03362 Pseudogymnoascus destructans GMDG_03362 I
GSTUM_00008644001 Tuber melanosporum GSTUM_00008644001 I
gw1.41.85.1 Phycomyces blakesleeanus gw1.41.85.1 I
H101_00568 Trichophyton interdigitale H101_00568 I
HETIRDRAFT_476671 Heterobasidion irregulare HETIRDRAFT_476671 N
HMPREF1624_05084 Sporothrix schenckii HMPREF1624_05084 I
LEMA_P042400.1 Leptosphaeria maculans LEMA_P042400.1 I
M404DRAFT_551810 Pisolithus tinctorius M404DRAFT_551810 N
M437DRAFT_74676 Aureobasidium melanogenum M437DRAFT_74676 I
M438DRAFT_346080 Aureobasidium pullulans M438DRAFT_346080 I
MAC_05350 Metarhizium acridum MAC_05350 I
MAC_07229 Metarhizium acridum MAC_07229 I
MAJ_07256 Metarhizium majus MAJ_07256 I
MAJ_11317 Metarhizium majus MAJ_11317 I
MAM_01740 Metarhizium album MAM_01740 I
MANI_017634 Metarhizium anisopliae MANI_017634 I
mat1-Mc Schizosaccharomyces pombe SPBC23G7.09 D
MAT2 Aspergillus nidulans CADANIAG00005695 I
mat3-Mc Schizosaccharomyces pombe SPBC1711.02 I
mat3-Mc Schizosaccharomyces pombe SPMTR.04 I
MBR_05099 Metarhizium brunneum MBR_05099 I
MBR_08193 Metarhizium brunneum MBR_08193 I
MGG_02978 Magnaporthe oryzae MGG_02978 I
MGG_03959 Magnaporthe oryzae MGG_03959 I
MGU_01572 Metarhizium guizhouense MGU_01572 I
MYCFIDRAFT_86029 Pseudocercospora fijiensis MYCFIDRAFT_86029 I
NechaG106035 Fusarium solani NechaG106035 I
NFIA_024390 Neosartorya fischeri CADNFIAG00002255 I
NFIA_105270 Neosartorya fischeri CADNFIAG00010303 I
Ocbimv22024932m.g Octopus bimaculoides Ocbimv22024932m.g I
OCS_00196 Ophiocordyceps sinensis OCS_00196 I
OCS_05413 Ophiocordyceps sinensis OCS_05413 I
OIDMADRAFT_143853 Oidiodendron maius OIDMADRAFT_143853 I
PABG_05778 Paracoccidioides brasiliensis PABG_05778 I
Pc22g06930 Penicillium chrysogenum Pc22g06930 I
PCH_Pc22g06930 Penicillium rubens PCH_Pc22g06930 I
PDE_01613 Penicillium oxalicum PDE_01613 I
PDE_06698 Penicillium oxalicum PDE_06698 I
PDE_08506 Penicillium oxalicum PDE_08506 I
PHACADRAFT_188459 Phanerochaete carnosa PHACADRAFT_188459 I
PIIN_01319 Piriformospora indica PIIN_01319 N
PITC_063570 Penicillium italicum PITC_063570 I
PITC_068990 Penicillium italicum PITC_068990 I
PMAA_040750 Talaromyces marneffei PMAA_040750 I
PMAA_040750 Penicillium marneffei PMAA_040750 I
PNEG_02275 Pneumocystis murina PNEG_02275 I
PredSwiss_CON647.2 Pneumocystis carinii PredSwiss_CON647.2 I
PredSwiss_EST753.1 Pneumocystis carinii PredSwiss_EST753.1 I
PTRG_06171 Pyrenophora triticirepentis PTRG_06171 I
PTT_07342 Pyrenophora teres PTT_07342 I
PV06_08316 Exophiala oligosperma PV06_08316 I
PV08_07043 Exophiala spinifera PV08_07043 I
PVAR5_3110 Byssochlamys spectabilis PVAR5_3110 I
S40285_03081 Stachybotrys chlorohalonata S40285_03081 I
S40288_01674 Stachybotrys chartarum S40288_01674 I
S40288_01998 Stachybotrys chartarum S40288_01998 I
SAPIO_CDS2868 Scedosporium apiospermum SAPIO_CDS2868 I
SBOR_9074 Sclerotinia borealis SBOR_9074 I
SEPMUDRAFT_153151 Sphaerulina musiva SEPMUDRAFT_153151 I
SETTUDRAFT_174840 Setosphaeria turcica SETTUDRAFT_174840 I
SMAC_05404 Sordaria macrospora SMAC_05404 I
SNOG_07773 Stagonospora nodorum SNOG_07773 I
SPBR_08948 Sporothrix brasiliensis SPBR_08948 I
SPBR_09078 Sporothrix brasiliensis SPBR_09078 I
SPPG_01923 Spizellomyces punctatus SPPG_01923 I
SS1G_04006 Sclerotinia sclerotiorum SS1G_04006 I
TEQG_04869 Trichophyton equinum TEQG_04869 I
TRIATDRAFT_33998 Trichoderma atroviride TRIATDRAFT_33998 I
TRIREDRAFT_124341 Trichoderma reesei TRIREDRAFT_124341 I
TRIVIDRAFT_52649 Trichoderma virens TRIVIDRAFT_52649 N
TSTA_008530 Talaromyces stipitatus TSTA_008530 I
TSTA_077960 Talaromyces stipitatus TSTA_077960 I
U727_00429890111 Penicillium solitum U727_00429890111 I
U727_00431010161 Penicillium solitum U727_00431010161 I
UCREL1_2891 Eutypa lata UCREL1_2891 N
UV8b_1585 Ustilaginoidea virens UV8b_1585 I
UV8b_664 Ustilaginoidea virens UV8b_664 I
V499_06181 Pseudogymnoascus pannorum V499_06181 I
VDAG_02444 Verticillium dahliae VDAG_02444 I
VHEMI05549 Torrubiella hemipterigena VHEMI05549 I
VHEMI07104 Torrubiella hemipterigena VHEMI07104 I
X797_008883 Metarhizium robertsii X797_008883 I
YALI0_B02266g Yarrowia lipolytica YALI0_B02266g I