Traes_1DL_7DDE52966 (Triticum aestivum)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03638 (TCR) IPR005172 Traes_1DL_7DDE52966 T345827_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCX2
M07300_2.00 		Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW		 Dap-seq
OMalley et al.(2016)
TCX2_col_a 		0.672 0.281
TCX2
M07301_2.00 		Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA		 Dap-seq
OMalley et al.(2016)
TCX2_colamp_a 		0.672 0.281
TSO1
M07299_2.00 		Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW		 Dap-seq
OMalley et al.(2016)
TSO1_col_a 		0.672 0.281
TCX3
M01087_2.00 		Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN		 PBM
Sullivan et al.(2014)
pTH7218 		0.672 0.272
TCX3
M02522_2.00 		Arabidopsis thaliana
WTTYAAAH
DTTTRAAW		 PBM
Weirauch et al.(2014)
pTH7421 		0.672 0.272
TCX3
M07297_2.00 		Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH		 Dap-seq
OMalley et al.(2016)
SOL1_colamp_a 		0.672 0.272
TCX3
M07298_2.00 		Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW		 Dap-seq
OMalley et al.(2016)
SOL1_col 		0.672 0.272
GE12548
M02529_2.00 		Drosophila yakuba
DTTYAAAY
RTTTRAAH		 PBM
Weirauch et al.(2014)
pTH9262 		0.672 0.263
ENSTSYG00000005291
M02528_2.00 		Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN		 PBM
Weirauch et al.(2014)
pTH9366 		0.672 0.254
XP_002124866.1
M01321_2.00 		Ciona intestinalis
NDTTYRAAN
NTTYRAAHN		 PBM
Lambert et al.(2019)
pTH9835 		0.672 0.254
PK22848.1
M02532_2.00 		Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9724 		0.672 0.254
PK27683.1
M01322_2.00 		Cannabis sativa
NDTTYAAAH
DTTTRAAHN		 PBM
Lambert et al.(2019)
pTH11347 		0.672 0.254
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00 		Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN		 PBM
Weirauch et al.(2014)
pTH9252 		0.672 0.254
AT2G20110
M02520_2.00 		Arabidopsis thaliana
DTTTAAAH
DTTTAAAH		 PBM
Weirauch et al.(2014)
pTH7914 		0.672 0.246
TCX4
M02521_2.00 		Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH		 PBM
Weirauch et al.(2014)
pTH7573 		0.672 0.246
TCX5
M02523_2.00 		Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN		 PBM
Weirauch et al.(2014)
pTH8164 		0.672 0.246
BGIBMGA008956
M02524_2.00 		Bombyx mori
AATTTAAAW
WTTTAAATT		 PBM
Weirauch et al.(2014)
pTH9238 		0.672 0.246
BRADI1G55710
M02525_2.00 		Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN		 PBM
Weirauch et al.(2014)
pTH9241 		0.672 0.246
lin54
M02526_2.00 		Danio rerio
NHTYRAAH
DTTYRADN		 PBM
Weirauch et al.(2014)
pTH8399 		0.672 0.246
LIN54
M02527_2.00 		Gallus gallus
NRTTYAAAH
DTTTRAAYN		 PBM
Weirauch et al.(2014)
pTH8566 		0.672 0.246
NEMVEDRAFT_v1g111410
M01320_2.00 		Nematostella vectensis
NNNNYRWRN
NYWYRNNNN		 PBM
Lambert et al.(2019)
pTH9771 		0.672 0.246
SPU_025306
M02531_2.00 		Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN		 PBM
Weirauch et al.(2014)
pTH9286 		0.672 0.246
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00 		Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN		 PBM
Weirauch et al.(2014)
pTH9457 		0.672 0.246
AT2G20110
M07295_2.00 		Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_col_a 		0.672 0.246
AT2G20110
M07296_2.00 		Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a 		0.672 0.246
AT5G25790
M01319_2.00 		Arabidopsis thaliana
NHYRAAHN
NDTTYRDN		 PBM
Lambert et al.(2019)
pTH11533 		0.672 0.237
gw1.20.00.89.1
M02535_2.00 		Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW		 PBM
Weirauch et al.(2014)
pTH9647 		0.672 0.237
GSPATT00010696001
M02530_2.00 		Paramecium tetraurelia
NNBRAAHN
NDTTYVNN		 PBM
Weirauch et al.(2014)
pTH8720 		0.672 0.228
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_1DL_7DDE52966.1 TCR/CxC 3 41
Traes_1DL_7DDE52966.1 TCR/CxC 108 146
Traes_1DL_7DDE52966.1 TCR/CxC 154 197

Links

Other TCR/CxC family TFs
Other Triticum aestivum TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG001574.1 Alligator sinensis Alligator_sinensis_CCG001574.1 I
ATF5 Pteropus vampyrus ENSPVAG00000016916 I
ATF5 Loxodonta africana ENSLAFG00000010812 I
Atf5 Mus musculus ENSMUSG00000038539 I
ATF5 Otolemur garnettii ENSOGAG00000024883 I
ATF5 Oryzias latipes ENSORLG00000007564 I
ATF5 Procavia capensis ENSPCAG00000010141 I
ATF5 Homo sapiens ENSG00000169136 D
ATF5 Felis catus ENSFCAG00000012175 I
ATF5 Equus caballus ENSECAG00000018168 I
ATF5 Pan troglodytes ENSPTRG00000011327 I
ATF5 Dasypus novemcinctus ENSDNOG00000047448 I
Atf5 Rattus norvegicus ENSRNOG00000020060 I
ATF5 Sus scrofa ENSSSCG00000003201 I
ATF5 Tursiops truncatus ENSTTRG00000001125 I
ATF5 Callithrix jacchus ENSCJAG00000004209 I
ATF5 Canis familiaris ENSCAFG00000029541 I
ATF5 Bos taurus ENSBTAG00000003457 I
atf5 Xenopus tropicalis XB-GENE-5808898 I
ATF5 Anolis carolinensis ENSACAG00000024934 I
atf5.2 Xenopus tropicalis XB-GENE-5902427 I
atf5.2.S Xenopus laevis XB-GENE-5902505 I
atf5a Takifugu rubripes ENSTRUG00000016588 I
atf5a Tetraodon nigroviridis ENSTNIG00000011751 I
atf5a Danio rerio ENSDARG00000068096 I
atf5b Danio rerio ENSDARG00000077785 I
CGI_10022808 Crassostrea gigas CGI_10022808 I
Cmyd_10001064 Chelonia mydas Cmyd_10001064 I
ENSAMEG00000013562 Ailuropoda melanoleuca ENSAMEG00000013562 I
ENSAMXG00000002726 Astyanax mexicanus ENSAMXG00000002726 I
ENSAMXG00000003363 Astyanax mexicanus ENSAMXG00000003363 I
ENSBTAP00000004485-D1 Bos grunniens ENSBTAP00000004485-D1 I
ENSCPOG00000021087 Cavia porcellus ENSCPOG00000021087 I
ENSCSAG00000002412 Chlorocebus sabaeus ENSCSAG00000002412 I
ENSDORG00000002803 Dipodomys ordii ENSDORG00000002803 I
ENSGACG00000020416 Gasterosteus aculeatus ENSGACG00000020416 I
ENSGGOG00000010241 Gorilla gorilla ENSGGOG00000010241 I
ENSGGOG00000027048 Gorilla gorilla ENSGGOG00000027048 I
ENSGMOG00000005591 Gadus morhua ENSGMOG00000005591 I
ENSLACG00000008703 Latimeria chalumnae ENSLACG00000008703 I
ENSLOCG00000003562 Lepisosteus oculatus ENSLOCG00000003562 I
ENSMEUG00000012685 Macropus eugenii ENSMEUG00000012685 I
ENSMICG00000003145 Microcebus murinus ENSMICG00000003145 I
ENSMMUG00000011630 Macaca mulatta ENSMMUG00000011630 I
ENSMMUP00000015263 Macaca fascicularis ENSMMUP00000015263 I
ENSMPUG00000002298 Mustela putorius furo ENSMPUG00000002298 I
ENSNLEG00000005470 Nomascus leucogenys ENSNLEG00000005470 I
ENSONIG00000005408 Oreochromis niloticus ENSONIG00000005408 I
ENSONIG00000014771 Oreochromis niloticus ENSONIG00000014771 I
ENSORLG00000015241 Oryzias latipes ENSORLG00000015241 I
ENSPANG00000024418 Papio anubis ENSPANG00000024418 I
ENSPFOG00000004847 Poecilia formosa ENSPFOG00000004847 I
ENSPFOG00000009660 Poecilia formosa ENSPFOG00000009660 I
ENSPPYG00000015495 Pongo abelii ENSPPYG00000015495 I
ENSPSIG00000014590 Pelodiscus sinensis ENSPSIG00000014590 I
ENSTNIG00000014367 Tetraodon nigroviridis ENSTNIG00000014367 I
ENSTRUG00000011463 Takifugu rubripes ENSTRUG00000011463 I
ENSXMAG00000012355 Xiphophorus maculatus ENSXMAG00000012355 I
ENSXMAG00000012359 Xiphophorus maculatus ENSXMAG00000012359 I
e_gw.394.39.1 Branchiostoma floridae e_gw.394.39.1 I
e_gw.5.489.1 Branchiostoma floridae e_gw.5.489.1 I
Myotis_brandtii_ATF5_10017676 Myotis brandtii Myotis_brandtii_ATF5_10017676 I
Ogr01256 Ophisaurus gracilis Ogr01256 I
Pvit_12444 Pogona vitticeps Pvit_12444 I