CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_5AS_282747CEF
(
Triticum aestivum
)
TCR/CxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03638 (TCR)
IPR005172
Traes_5AS_282747CEF
T345841_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BRADI1G55710
M02525_2.00
Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN
PBM
Weirauch et al.(2014)
pTH9241
0.672
0.908
PK22848.1
M02532_2.00
Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN
PBM
Weirauch et al.(2014)
pTH9724
0.672
0.895
TCX2
M07300_2.00
Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW
Dap-seq
OMalley et al.(2016)
TCX2_col_a
0.672
0.882
TCX2
M07301_2.00
Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA
Dap-seq
OMalley et al.(2016)
TCX2_colamp_a
0.672
0.882
TCX3
M01087_2.00
Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN
PBM
Sullivan et al.(2014)
pTH7218
0.672
0.868
TCX3
M02522_2.00
Arabidopsis thaliana
WTTYAAAH
DTTTRAAW
PBM
Weirauch et al.(2014)
pTH7421
0.672
0.868
TCX3
M07297_2.00
Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH
Dap-seq
OMalley et al.(2016)
SOL1_colamp_a
0.672
0.868
TCX3
M07298_2.00
Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW
Dap-seq
OMalley et al.(2016)
SOL1_col
0.672
0.868
TSO1
M07299_2.00
Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW
Dap-seq
OMalley et al.(2016)
TSO1_col_a
0.672
0.816
TCX4
M02521_2.00
Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH
PBM
Weirauch et al.(2014)
pTH7573
0.672
0.763
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00
Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN
PBM
Weirauch et al.(2014)
pTH9457
0.672
0.658
AT5G25790
M01319_2.00
Arabidopsis thaliana
NHYRAAHN
NDTTYRDN
PBM
Lambert et al.(2019)
pTH11533
0.672
0.592
ENSTSYG00000005291
M02528_2.00
Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN
PBM
Weirauch et al.(2014)
pTH9366
0.672
0.566
SPU_025306
M02531_2.00
Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN
PBM
Weirauch et al.(2014)
pTH9286
0.672
0.566
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00
Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN
PBM
Weirauch et al.(2014)
pTH9252
0.672
0.566
AT2G20110
M02520_2.00
Arabidopsis thaliana
DTTTAAAH
DTTTAAAH
PBM
Weirauch et al.(2014)
pTH7914
0.672
0.553
TCX5
M02523_2.00
Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN
PBM
Weirauch et al.(2014)
pTH8164
0.672
0.553
lin54
M02526_2.00
Danio rerio
NHTYRAAH
DTTYRADN
PBM
Weirauch et al.(2014)
pTH8399
0.672
0.553
LIN54
M02527_2.00
Gallus gallus
NRTTYAAAH
DTTTRAAYN
PBM
Weirauch et al.(2014)
pTH8566
0.672
0.553
GSPATT00010696001
M02530_2.00
Paramecium tetraurelia
NNBRAAHN
NDTTYVNN
PBM
Weirauch et al.(2014)
pTH8720
0.672
0.553
XP_002124866.1
M01321_2.00
Ciona intestinalis
NDTTYRAAN
NTTYRAAHN
PBM
Lambert et al.(2019)
pTH9835
0.672
0.553
AT2G20110
M07295_2.00
Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_col_a
0.672
0.553
AT2G20110
M07296_2.00
Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW
Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a
0.672
0.553
NEMVEDRAFT_v1g111410
M01320_2.00
Nematostella vectensis
NNNNYRWRN
NYWYRNNNN
PBM
Lambert et al.(2019)
pTH9771
0.672
0.539
gw1.20.00.89.1
M02535_2.00
Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW
PBM
Weirauch et al.(2014)
pTH9647
0.672
0.539
BGIBMGA008956
M02524_2.00
Bombyx mori
AATTTAAAW
WTTTAAATT
PBM
Weirauch et al.(2014)
pTH9238
0.672
0.526
GE12548
M02529_2.00
Drosophila yakuba
DTTYAAAY
RTTTRAAH
PBM
Weirauch et al.(2014)
pTH9262
0.672
0.526
PK27683.1
M01322_2.00
Cannabis sativa
NDTTYAAAH
DTTTRAAHN
PBM
Lambert et al.(2019)
pTH11347
0.672
0.500
For this family, TFs with SR scores >
0.660
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_5AS_282747CEF.2
TCR/CxC
456
493
CKRCSCKKSKCLKLYCECFHAGVFCSEPCSCQGCLNKP
Traes_5AS_282747CEF.2
TCR/CxC
542
579
KRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAF
Links
Other
TCR/CxC
family TFs
Other
Triticum aestivum
TFs
1213 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_07823
Capronia coronata
A1O1_07823
I
A1O3_10149
Capronia epimyces
A1O3_10149
I
A1O5_05843
Cladophialophora psammophila
A1O5_05843
I
A1O5_07574
Cladophialophora psammophila
A1O5_07574
I
A1O7_10006
Cladophialophora yegresii
A1O7_10006
I
A1O9_08861
Exophiala aquamarina
A1O9_08861
I
ACLA_081690
Aspergillus clavatus
CADACLAG00007603
I
AGABI2DRAFT_192345
Agaricus bisporus
AGABI2DRAFT_192345
I
ANIA_04361
Aspergillus nidulans
CADANIAG00006097
I
ANIA_05218
Aspergillus nidulans
CADANIAG00003217
I
AOL_s00110g25
Arthrobotrys oligospora
AOL_s00110g25
I
ARB_01680
Arthroderma benhamiae
ARB_01680
I
ATEG_03672
Aspergillus terreus
CADATEAG00009127
I
ATEG_05575
Aspergillus terreus
CADATEAG00004870
I
BAUCODRAFT_33466
Baudoinia compniacensis
BAUCODRAFT_33466
I
BBA_04990
Beauveria bassiana
BBA_04990
I
Bcin04g06790
Botrytis cinerea
Bcin04g06790
I
BDDG_09624
Blastomyces dermatitidis
BDDG_09624
I
CADAFLAG00001559
Aspergillus flavus
CADAFLAG00001559
I
CADAFLAG00005079
Aspergillus flavus
CADAFLAG00005079
I
CADAORAG00003410
Aspergillus oryzae
CADAORAG00003410
I
CADAORAG00008017
Aspergillus oryzae
CADAORAG00008017
I
CHGG_08220
Chaetomium globosum
CHGG_08220
I
CIMG_04172
Coccidioides immitis
CIMG_04172
I
CMQ_3347
Grosmannia clavigera
CMQ_3347
I
Cob_07996
Colletotrichum orbiculare
Cob_07996
I
CPC735_002490
Coccidioides posadasii
CPC735_002490
I
cys-3
Neurospora crassa
NCU03536
D
DRE_04846
Drechslerella stenobrocha
DRE_04846
I
E5Q_01003
Mixia osmundae
E5Q_01003
I
EPUS_08958
Endocarpon pusillum
EPUS_08958
I
estExt_fgenesh1_pg.C_10753
Sporobolomyces roseus
estExt_fgenesh1_pg.C_10753
I
estExt_fgenesh1_pg.C_20710
Cryphonectria parasitica
estExt_fgenesh1_pg.C_20710
I
estExt_fgenesh1_pg.C_sca_3_chr4_2_00209
Nectria haematococca
estExt_fgenesh1_pg.C_sca_3_chr4_2_00209
I
estExt_fgeneshMC_kg.C_30191
Mucor circinelloides
estExt_fgeneshMC_kg.C_30191
I
estExt_fgeneshPB_pg.C_10913
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_10913
N
estExt_fgeneshPB_pg.C_60206
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_60206
I
estExt_fgeneshPB_pg.C_60225
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_60225
I
EURHEDRAFT_377850
Aspergillus ruber
EURHEDRAFT_377850
I
EURHEDRAFT_472160
Aspergillus ruber
EURHEDRAFT_472160
I
EV44_g2242
Erysiphe necator
EV44_g2242
I
e_gw1.00009.376.1
Aspergillus carbonarius
e_gw1.00009.376.1
I
e_gw1.5.1366.1
Mucor circinelloides
e_gw1.5.1366.1
N
F503_01948
Ophiostoma piceae uamh
F503_01948
I
fgenesh1_pm.00609_#_584
Aspergillus carbonarius
fgenesh1_pm.00609_#_584
I
FGRRES_05171
Fusarium graminearum
FGRRES_05171
I
FPSE_06572
Fusarium pseudograminearum
FPSE_06572
I
G647_08273
Cladophialophora carrionii
G647_08273
I
GGTG_10803
Gaeumannomyces graminis
GGTG_10803
I
GLOINDRAFT_340074
Rhizophagus irregularis
GLOINDRAFT_340074
I
GMDG_05082
Pseudogymnoascus destructans
GMDG_05082
I
GSTUM_00004031001
Tuber melanosporum
GSTUM_00004031001
I
GSTUM_00008609001
Tuber melanosporum
GSTUM_00008609001
I
gw1.14.38.1
Mucor circinelloides
gw1.14.38.1
I
H072_10866
Dactylellina haptotyla
H072_10866
I
H101_07194
Trichophyton interdigitale
H101_07194
I
H102_01270
Trichophyton rubrum
H102_01270
I
H105_01284
Trichophyton soudanense
H105_01284
I
HCBG_02259
Histoplasma capsulatum
HCBG_02259
I
HMPREF1120_08717
Exophiala dermatitidis
HMPREF1120_08717
I
HMPREF1541_02767
Cyphellophora europaea
HMPREF1541_02767
I
HMPREF1624_03651
Sporothrix schenckii
HMPREF1624_03651
I
K437DRAFT_226706
Tilletiaria anomala
K437DRAFT_226706
I
LEMA_P046430.1
Leptosphaeria maculans
LEMA_P046430.1
I
M7I_7549
Glarea lozoyensis
M7I_7549
I
MAM_00920
Metarhizium album
MAM_00920
I
MAPG_10034
Magnaporthe poae
MAPG_10034
I
MCYG_01281
Microsporum canis
MCYG_01281
I
MCYG_01281
Arthroderma otae
MCYG_01281
I
MGG_14561
Magnaporthe oryzae
MGG_14561
I
MGYG_01829
Microsporum gypseum
MGYG_01829
I
Moror_16484
Moniliophthora roreri
Moror_16484
I
MPER_02131
Moniliophthora perniciosa
MPER_02131
I
MPH_01173
Macrophomina phaseolina
MPH_01173
I
MVLG_04838
Microbotryum violaceum
MVLG_04838
I
MYCFIDRAFT_214535
Pseudocercospora fijiensis
MYCFIDRAFT_214535
I
MYCTH_57777
Myceliophthora thermophila
MYCTH_57777
I
NechaG99958
Fusarium solani
NechaG99958
I
NFIA_053200
Neosartorya fischeri
CADNFIAG00004377
N
OIDMADRAFT_101511
Oidiodendron maius
OIDMADRAFT_101511
I
PAAG_11856
Paracoccidioides sp lutzii
PAAG_11856
I
PABG_04174
Paracoccidioides brasiliensis
PABG_04174
I
Pc18g06160
Penicillium chrysogenum
Pc18g06160
I
Pc22g17390
Penicillium chrysogenum
Pc22g17390
I
PCH_Pc18g06160
Penicillium rubens
PCH_Pc18g06160
I
PCH_Pc22g17390
Penicillium rubens
PCH_Pc22g17390
I
PDE_05199
Penicillium oxalicum
PDE_05199
I
PDE_06105
Penicillium oxalicum
PDE_06105
I
PDIP_13730
Penicillium digitatum
PDIP_13730
I
PDIP_70460
Penicillium digitatum
PDIP_70460
I
PEX1_009430
Penicillium expansum
PEX1_009430
I
PEX1_101830
Penicillium expansum
PEX1_101830
I
PFL1_03384
Pseudozyma flocculosa
PFL1_03384
I
PHSY_007144
Pseudozyma hubeiensis
PHSY_007144
I
PILCRDRAFT_5774
Piloderma croceum
PILCRDRAFT_5774
N
PITC_070420
Penicillium italicum
PITC_070420
I
PITC_087850
Penicillium italicum
PITC_087850
I
PMAA_027760
Talaromyces marneffei
PMAA_027760
I
PMAA_027760
Penicillium marneffei
PMAA_027760
I
PODANS_6_4490
Podospora anserina
PODANS_6_4490
I
PV04_10539
Capronia semiimmersa
PV04_10539
I
PV05_03362
Exophiala xenobiotica
PV05_03362
I
PV06_08450
Exophiala oligosperma
PV06_08450
I
PV07_12300
Cladophialophora immunda
PV07_12300
I
PV08_06754
Exophiala spinifera
PV08_06754
I
PV09_03803
Verruconis gallopava
PV09_03803
I
PV11_06042
Exophiala sideris
PV11_06042
I
PVAR5_3614
Byssochlamys spectabilis
PVAR5_3614
I
PVAR5_4159
Byssochlamys spectabilis
PVAR5_4159
I
RHTO_00350
Rhodosporidium toruloides
RHTO_00350
I
RO3G_16530
Rhizopus oryzae
RO3G_16530
I
S40285_02008
Stachybotrys chlorohalonata
S40285_02008
I
S40288_01688
Stachybotrys chartarum
S40288_01688
I
SCLCIDRAFT_537897
Scleroderma citrinum
SCLCIDRAFT_537897
I
SERLA73DRAFT_176185
Serpula lacrymans
SERLA73DRAFT_176185
N
SJAG_04749
Schizosaccharomyces japonicus
SJAG_04749
I
SMAC_07774
Sordaria macrospora
SMAC_07774
I
SNOG_04964
Stagonospora nodorum
SNOG_04964
I
SNOG_04964
Phaeosphaeria nodorum
SNOG_04964
I
SOCG_04149
Schizosaccharomyces octosporus
SOCG_04149
I
SPBR_02042
Sporothrix brasiliensis
SPBR_02042
I
SPOG_00393
Schizosaccharomyces cryophilus
SPOG_00393
I
TEQG_06910
Trichophyton equinum
TEQG_06910
I
TESG_01481
Trichophyton tonsurans
TESG_01481
I
THITE_75012
Thielavia terrestris
THITE_75012
I
TRV_00028
Trichophyton verrucosum
TRV_00028
I
TSTA_070990
Talaromyces stipitatus
TSTA_070990
I
U727_00431304101
Penicillium solitum
U727_00431304101
I
U727_00434240161
Penicillium solitum
U727_00434240161
I
UCRNP2_8660
Neofusicoccum parvum
UCRNP2_8660
I
UCRPA7_8213
Togninia minima
UCRPA7_8213
I
UREG_05605
Uncinocarpus reesii
UREG_05605
I
V499_06269
Pseudogymnoascus pannorum
V499_06269
I
VDAG_04042
Verticillium dahliae
VDAG_04042
I
VHEMI00216
Torrubiella hemipterigena
VHEMI00216
I
Z517_12228
Fonsecaea pedrosoi
Z517_12228
I
Z518_06161
Rhinocladiella mackenziei
Z518_06161
I
Z519_04890
Cladophialophora bantiana
Z519_04890
I
Z519_06138
Cladophialophora bantiana
Z519_06138
I
zip1
Schizosaccharomyces pombe
SPAC25G10.03
D