CBN10324 (Caenorhabditis brenneri)
THAP finger

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05485 (THAP) IPR006612 CBN10324 T347971_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lin-15B
M09654_2.00 		Caenorhabditis elegans
CRRTRGAGCGCRYTTGCWNH
DNWGCAARYGCGCTCYAYYG		 Misc
Heinz et al.(2010)
cElegans-L3-LIN15B_modEncode 		0.740 0.740
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN10324 THAP finger 1134 1207

Links

Other THAP finger family TFs
Other Caenorhabditis brenneri TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ADAP Arabidopsis thaliana AT1G16060 I
Aquca_009_00095 Aquilegia coerulea Aquca_009_00095 N
BGIOSGA021939 Oryza indica BGIOSGA021939 N
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N
Cucsa.005540 Cucumis sativus Cucsa.005540 N
Eucgr.G02636 Eucalyptus grandis Eucgr.G02636 N
F775_22930 Aegilops tauschii F775_22930 N
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I
GRMZM2G131266 Zea mays GRMZM2G131266 N
GRMZM2G174834 Zea mays GRMZM2G174834 I
mgf003341m Mimulus guttatus mgf003341m N
MLOC_57845 Hordeum vulgare MLOC_57845 N
OBART08G16250 Oryza barthii OBART08G16250 N
OGLUM06G02990 Oryza glumaepatula OGLUM06G02990 N
Pavir.Fb01620 Panicum virgatum Pavir.Fb01620 N
Pavir.J37767 Panicum virgatum Pavir.J37767 N
PGSC0003DMG400014157 Solanum tuberosum PGSC0003DMG400014157 N
PK11678.1 Cannabis sativa PK11678.1 N
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I
Traes_5DL_B49D156B7 Triticum aestivum Traes_5DL_B49D156B7 N
WRI1 Arabidopsis thaliana AT3G54320 I