CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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10921_YIL056W
(
Saccharomyces mikatae
)
VHR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04001 (Vhr1)
IPR007147
10921_YIL056W
T350455_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VHR1
M08640_2.00
Saccharomyces cerevisiae
TCANNNNNNNNTGATT
AATCANNNNNNNNTGA
Misc
DeBoer et al.(2011)
YIL056W_1325
1.000
1.000
VHR2
M00917_2.00
Saccharomyces cerevisiae
NRTGACTCAN
NTGAGTCAYN
PBM
Gordan et al.(2011)
Vhr2
0.802
0.802
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
10921_YIL056W
VHR1
16
106
SGNGATHKIRELLNFNDEKKWKQFSSRRLELIDKFQLSQYKASEQDQNIKQIATILRTEFGYPVSCSKEFEKLVTAAVQSVRRNRKRSKKR
Links
Other
VHR1
family TFs
Other
Saccharomyces mikatae
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCPOG00000000188
Cavia porcellus
ENSCPOG00000000188
I
ENSCSAG00000001196
Chlorocebus sabaeus
ENSCSAG00000001196
I
ENSP00000361373
Macaca fascicularis
ENSP00000361373
I
ENSPANG00000024685
Papio anubis
ENSPANG00000024685
I
ENSPPYG00000001434
Pongo abelii
ENSPPYG00000001434
I
KLF17
Callithrix jacchus
ENSCJAG00000003910
I
KLF17
Homo sapiens
ENSG00000171872
D
KLF17
Gorilla gorilla
ENSGGOG00000026978
I
KLF17
Macaca mulatta
ENSMMUG00000005986
I
KLF17
Pan troglodytes
ENSPTRG00000000652
I
KLF17
Tursiops truncatus
ENSTTRG00000013114
I
KLF17
Vicugna pacos
ENSVPAG00000004627
I