SAKL0F08734g (Lachancea kluyveri)
VHR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04001 (Vhr1) IPR007147 SAKL0F08734g T350463_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VHR2
M00917_2.00 		Saccharomyces cerevisiae
NRTGACTCAN
NTGAGTCAYN		 PBM
Gordan et al.(2011)
Vhr2 		0.813 0.813
VHR1
M08640_2.00 		Saccharomyces cerevisiae
TCANNNNNNNNTGATT
AATCANNNNNNNNTGA		 Misc
DeBoer et al.(2011)
YIL056W_1325 		0.802 0.802
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SAKL0F08734g VHR1 17 107

Links

Other VHR1 family TFs
Other Lachancea kluyveri TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
10921_YIL056W Saccharomyces mikatae 10921_YIL056W I 0.802
11035_YIL056W Saccharomyces paradoxus 11035_YIL056W I 0.802
11559_YIL056W Saccharomyces bayanus 11559_YIL056W I 0.802
6292_YER064C Saccharomyces paradoxus 6292_YER064C I 0.791
6651_YER064C Saccharomyces mikatae 6651_YER064C I 0.791
7027_YER064C Saccharomyces bayanus 7027_YER064C I 0.780
AACERI_AaceriADL067C Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL067C I 0.901
AGOS_ADL067C Ashbya gossypii AGOS_ADL067C I 0.901
CAGL0J03014g Candida glabrata CAGL0J03014g I 0.725
Ecym_4329 Eremothecium cymbalariae Ecym_4329 I 0.890
KAFR_0I01770 Kazachstania africana KAFR_0I01770 I 0.747
KAFR_0I01790 Kazachstania africana KAFR_0I01790 N 0.714
KAFR_0L00930 Kazachstania africana KAFR_0L00930 I 0.802
KLLA0_C08151g Kluyveromyces lactis KLLA0_C08151g I 0.857
KLTH0A04444g Lachancea thermotolerans KLTH0A04444g I 0.813
KLTH0A04444g Kluyveromyces thermotolerans KLTH0A04444g I 0.813
KNAG_0L01530 Kazachstania naganishii KNAG_0L01530 I 0.769
Kpol_1066p52 Vanderwaltozyma polyspora Kpol_1066p52 I 0.824
Kwal_5842 Kluyveromyces waltii Kwal_5842 I 0.780
LALA0_S01e02388g Lachancea lanzarotensis LALA0_S01e02388g I 0.780
NCAS_0A13540 Naumovozyma castellii NCAS_0A13540 I 0.758
NCAS_0E03320 Naumovozyma castellii NCAS_0E03320 I 0.813
NDAI_0A02490 Naumovozyma dairenensis NDAI_0A02490 I 0.736
NDAI_0E04810 Naumovozyma dairenensis NDAI_0E04810 I 0.791
Scas_Contig701.7 Saccharomyces castellii Scas_Contig701.7 I 0.813
Scas_Contig704.29 Saccharomyces castellii Scas_Contig704.29 I 0.758
SKUD_176205 Saccharomyces kudriavzevii SKUD_176205 I 0.780
SU7_1620 Saccharomyces arboricola SU7_1620 I 0.802
TBLA_0C04650 Tetrapisispora blattae TBLA_0C04650 I 0.857
TDEL_0H01980 Torulaspora delbrueckii TDEL_0H01980 I 0.846
TPHA_0J00900 Tetrapisispora phaffii TPHA_0J00900 I 0.835
VHR1 Saccharomyces cerevisiae YIL056W D 0.802
VHR2 Saccharomyces cerevisiae YER064C D 0.813
ZBAI_00133 Zygosaccharomyces bailii ZBAI_00133 I 0.835
ZBAI_05302 Zygosaccharomyces bailii ZBAI_05302 I 0.846
ZYRO0C08250g Zygosaccharomyces rouxii ZYRO0C08250g I 0.857