CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0147s0016
(
Capsella grandiflora
)
Whirly
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08536 (Whirly)
IPR013742
Cagra.0147s0016
T350616_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0147s0016.1.p
Whirly
58
193
IFKGKAALSVEPVLPTFTEIDSGNLRLDRRGSLMMTFMPASGERKYDWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSIEPHADGSGYFISLGVINSILKTNDRIVVPVTTAEFTVMKTA
Links
Other
Whirly
family TFs
Other
Capsella grandiflora
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_03235
Phytophthora parasitica
F443_03235
N
0.000
fgenesh_scip_prom.28083.3855
Phytophthora lateralis
fgenesh_scip_prom.28083.3855
N
0.000
Phyra93594
Phytophthora ramorum
Phyra93594
N
0.000