CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.013G077400
(
Gossypium raimondii
)
Whirly
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08536 (Whirly)
IPR013742
Gorai.013G077400
T350633_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.013G077400.10
Whirly
94
189
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFKGKRCSKQTSKRGRKC
Gorai.013G077400.11
Whirly
94
150
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQIKCKI
Gorai.013G077400.12
Whirly
93
149
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQIKCKI
Gorai.013G077400.1
Whirly
94
229
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLGVQNKLLNVDENVYIPITRGEFTVLKSA
Gorai.013G077400.2
Whirly
94
229
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLGVQNKLLNVDENVYIPITRGEFTVLKSA
Gorai.013G077400.3
Whirly
93
228
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLGVQNKLLNVDENVYIPITRGEFTVLKSA
Gorai.013G077400.4
Whirly
93
228
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLGVQNKLLNVDENVYIPITRGEFTVLKSA
Gorai.013G077400.5
Whirly
94
229
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLGVQNKLLNVDENVYIPITRGEFTVLKSA
Gorai.013G077400.6
Whirly
94
229
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLGVQNKLLNVDENVYIPITRGEFTVLKSA
Gorai.013G077400.7
Whirly
94
206
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLGNAQF
Gorai.013G077400.8
Whirly
93
207
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLVHFAISF
Gorai.013G077400.9
Whirly
94
229
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLGVQNKLLNVDENVYIPITRGEFTVLKSA
Links
Other
Whirly
family TFs
Other
Gossypium raimondii
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O3_01599
Capronia epimyces
A1O3_01599
N
CFIO01_08941
Colletotrichum fioriniae
CFIO01_08941
N
CGGC5_834
Colletotrichum gloeosporioides
CGGC5_834
N
Cob_04241
Colletotrichum orbiculare
Cob_04241
N
CSUB01_05236
Colletotrichum sublineola
CSUB01_05236
N
GLRG_04974
Colletotrichum graminicola
GLRG_04974
I
S40285_05512
Stachybotrys chlorohalonata
S40285_05512
I
S40288_01495
Stachybotrys chartarum
S40288_01495
I