CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra021521
(
Brassica rapa
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
Bra021521
T350757_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AtGRF6
M02545_2.00
Arabidopsis thaliana
NNNNYDNN
NNHRNNNN
PBM
Weirauch et al.(2014)
pTH7356
0.744
0.744
AtGRF6
M07369_2.00
Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN
Dap-seq
OMalley et al.(2016)
AtGRF6_col_a
0.744
0.744
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra021521.1-P
WRC
48
90
PEPGRCRRTDGKKWRCSREAHPDSKYCEKHMHRGRNRAKKSID
Links
Other
WRC
family TFs
Other
Brassica rapa
TFs
363 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy