CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI1G46427
(
Brachypodium distachyon
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
BRADI1G46427
T350774_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AtGRF6
M02545_2.00
Arabidopsis thaliana
NNNNYDNN
NNHRNNNN
PBM
Weirauch et al.(2014)
pTH7356
0.744
0.744
AtGRF6
M07369_2.00
Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN
Dap-seq
OMalley et al.(2016)
AtGRF6_col_a
0.744
0.744
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI1G46427.1
WRC
92
134
PEPGRCRRTDGKKWRCSREAFGESKYCDRHMHRGKNRSRKPVE
Links
Other
WRC
family TFs
Other
Brachypodium distachyon
TFs
552 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R010551
Calypte anna
Aan_R010551
N
0.000
AAV49747
Xenopus laevis
AAV49747
N
0.000
Afo_R015981
Aptenodytes forsteri
Afo_R015981
N
0.000
ahr
Xenopus tropicalis
XB-GENE-983107
N
0.000
AHRR
Anolis carolinensis
ENSACAG00000008710
N
0.000
AHRR
Callithrix jacchus
ENSCJAG00000017613
N
0.000
AHRR
Equus caballus
ENSECAG00000017812
N
0.000
ahrr
Takifugu rubripes
ENSTRUG00000003745
N
0.000
ENSFALG00000004883
Ficedula albicollis
ENSFALG00000004883
N
0.000
ENSGMOG00000004709
Gadus morhua
ENSGMOG00000004709
N
0.000
ENSLACG00000012651
Latimeria chalumnae
ENSLACG00000012651
N
0.000
ENSLOCG00000013271
Lepisosteus oculatus
ENSLOCG00000013271
N
0.000
Gfo_R006189
Geospiza fortis
Gfo_R006189
N
0.000
Pvit_18498
Pogona vitticeps
Pvit_18498
N
0.000
XP_002935182
Xenopus tropicalis
XP_002935182
N
0.000