CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OB04G31020
(
Oryza brachyantha
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
OB04G31020
T350986_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AtGRF6
M02545_2.00
Arabidopsis thaliana
NNNNYDNN
NNHRNNNN
PBM
Weirauch et al.(2014)
pTH7356
0.814
0.814
AtGRF6
M07369_2.00
Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN
Dap-seq
OMalley et al.(2016)
AtGRF6_col_a
0.814
0.814
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB04G31020.1
WRC
77
119
PEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVE
Links
Other
WRC
family TFs
Other
Oryza brachyantha
TFs
588 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O3_06358
Capronia epimyces
A1O3_06358
N
HMPREF1120_09077
Exophiala dermatitidis
HMPREF1120_09077
N
HMPREF1541_02517
Cyphellophora europaea
HMPREF1541_02517
N
MCYG_04601
Microsporum canis
MCYG_04601
N
MCYG_04601
Arthroderma otae
MCYG_04601
N
PV10_01710
Exophiala mesophila
PV10_01710
N
PVAR5_2342
Byssochlamys spectabilis
PVAR5_2342
N
Z518_07681
Rhinocladiella mackenziei
Z518_07681
N