POPTR_0016s05850 (Populus trichocarpa)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF08879 (WRC) IPR014977 POPTR_0016s05850 T351210_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G42040
M01088_2.00 		Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN		 PBM
Sullivan et al.(2014)
pTH7503 		0.884 0.884
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0016s05850.1 WRC 212 254

Links

Other WRC family TFs
Other Populus trichocarpa TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CaO19.12230 Candida albicans CaO19.12230 N 0.000
CaO19.4766 Candida albicans CaO19.4766 N 0.000
CD36_08580 Candida dubliniensis CD36_08580 N 0.000
CLUG_05051 Candida lusitaniae CLUG_05051 N 0.000
CLUG_05051 Clavispora lusitaniae CLUG_05051 N 0.000
CORT_0G01040 Candida orthopsilosis CORT_0G01040 N 0.000
CPAG_04295 Candida parapsilosis CPAG_04295 N 0.000
CTRG_03264 Candida tropicalis CTRG_03264 N 0.000
fgenesh1_pg.C_chr_3.1000414 Pichia stipitis fgenesh1_pg.C_chr_3.1000414 N 0.000
G210_5450 Candida maltosa G210_5450 N 0.000
GNLVRS01_PISO0I05530g Millerozyma farinosa GNLVRS01_PISO0I05530g N 0.000
GNLVRS01_PISO0J07335g Millerozyma farinosa GNLVRS01_PISO0J07335g N 0.000
HPODL_00099 Ogataea parapolymorpha HPODL_00099 N 0.000
PICST_30827 Scheffersomyces stipitis PICST_30827 N 0.000
SPAPADRAFT_55840 Spathaspora passalidarum SPAPADRAFT_55840 N 0.000
ZYRO0A00440g Zygosaccharomyces rouxii ZYRO0A00440g I 0.000