CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb04g030770
(
Sorghum bicolor
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
Sb04g030770
T351239_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AtGRF6
M02545_2.00
Arabidopsis thaliana
NNNNYDNN
NNHRNNNN
PBM
Weirauch et al.(2014)
pTH7356
0.814
0.814
AtGRF6
M07369_2.00
Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN
Dap-seq
OMalley et al.(2016)
AtGRF6_col_a
0.814
0.814
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb04g030770.1
WRC
130
172
PEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVE
Links
Other
WRC
family TFs
Other
Sorghum bicolor
TFs
588 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AEBP2
Takifugu rubripes
ENSTRUG00000017011
N
ENSNLEG00000004553
Nomascus leucogenys
ENSNLEG00000004553
N