CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb10g006810
(
Sorghum bicolor
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
Sb10g006810
T351247_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G42040
M01088_2.00
Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN
PBM
Sullivan et al.(2014)
pTH7503
0.810
0.810
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb10g006810.1
WRC
214
255
LEGSRCSRVNGRGWRCSQPTLVGYSLCEHHLGKGRMRSAAAA
Links
Other
WRC
family TFs
Other
Sorghum bicolor
TFs
96 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_01626
Beauveria bassiana
BBA_01626
N
CCM_00106
Cordyceps militaris
CCM_00106
N
CFIO01_08383
Colletotrichum fioriniae
CFIO01_08383
N
CGGC5_8876
Colletotrichum gloeosporioides
CGGC5_8876
N
Cob_13289
Colletotrichum orbiculare
Cob_13289
N
CPUR_01633
Claviceps purpurea
CPUR_01633
N
CSUB01_06780
Colletotrichum sublineola
CSUB01_06780
N
F503_04232
Ophiostoma piceae uamh
F503_04232
N
FFUJ_00487
Fusarium fujikuroi
FFUJ_00487
N
fgenesh1_pg.sca_1_chr1_3_0000989
Nectria haematococca
fgenesh1_pg.sca_1_chr1_3_0000989
N
FGRRES_00750
Fusarium graminearum
FGRRES_00750
N
FOXG_01081
Fusarium oxysporum
FOXG_01081
N
FPSE_01269
Fusarium pseudograminearum
FPSE_01269
N
FVEG_00433
Fusarium verticillioides
FVEG_00433
N
GGTG_07801
Gaeumannomyces graminis
GGTG_07801
N
GLRG_00605
Colletotrichum graminicola
GLRG_00605
N
HMPREF1624_07505
Sporothrix schenckii
HMPREF1624_07505
N
MAC_05157
Metarhizium acridum
MAC_05157
N
MAJ_06003
Metarhizium majus
MAJ_06003
N
MAM_06097
Metarhizium album
MAM_06097
N
MANI_025150
Metarhizium anisopliae
MANI_025150
N
MBR_00240
Metarhizium brunneum
MBR_00240
N
MGU_08133
Metarhizium guizhouense
MGU_08133
N
NechaG75378
Fusarium solani
NechaG75378
N
OCS_04926
Ophiocordyceps sinensis
OCS_04926
N
PFICI_06254
Pestalotiopsis fici
PFICI_06254
N
SAPIO_CDS5481
Scedosporium apiospermum
SAPIO_CDS5481
N
SPBR_07989
Sporothrix brasiliensis
SPBR_07989
N
TRIATDRAFT_9815
Trichoderma atroviride
TRIATDRAFT_9815
N
TRIREDRAFT_43269
Trichoderma reesei
TRIREDRAFT_43269
N
TRIVIDRAFT_19860
Trichoderma virens
TRIVIDRAFT_19860
N
UCREL1_2115
Eutypa lata
UCREL1_2115
N
UCRPA7_6169
Togninia minima
UCRPA7_6169
N
VDBG_07369
Verticillium alfalfae
VDBG_07369
N
VDBG_07369
Verticillium albo atrum
VDBG_07369
N
VHEMI05051
Torrubiella hemipterigena
VHEMI05051
N
X797_002594
Metarhizium robertsii
X797_002594
N