CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si030809m.g
(
Setaria italica
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
Si030809m.g
T351272_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si030809m
WRC
180
222
PEPGRCRRTDGKKWRCWRSTIPNEKYCERHMHRGRKRPVQLVV
Links
Other
WRC
family TFs
Other
Setaria italica
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30190.m011066
Ricinus communis
30190.m011066
I
0.721
AMTR_s00018p00250840
Amborella trichopoda
AMTR_s00018p00250840
N
0.721
AMTR_s00048p00216350
Amborella trichopoda
AMTR_s00048p00216350
I
0.721
Aquca_122_00004
Aquilegia coerulea
Aquca_122_00004
N
0.721
AtGRF7
Vitis vinifera
VIT_16s0098g01080
N
0.721
BGIOSGA025662
Oryza indica
BGIOSGA025662
N
0.930
Bra005268
Brassica rapa
Bra005268
N
0.721
BRADI1G28400
Brachypodium distachyon
BRADI1G28400
N
0.930
BRADI2G14320
Brachypodium distachyon
BRADI2G14320
N
0.930
cassava30116.valid.m1
Manihot esculenta
cassava30116.valid.m1
I
0.721
Ca_04035
Cicer arietinum
Ca_04035
N
0.721
Ciclev10022033m.g
Citrus clementina
Ciclev10022033m.g
I
0.721
Eucgr.A01534
Eucalyptus grandis
Eucgr.A01534
N
0.721
evm.TU.supercontig_3.145
Carica papaya
evm.TU.supercontig_3.145
N
0.721
F775_29935
Aegilops tauschii
F775_29935
N
0.951
GLYMA04G40880
Glycine max
GLYMA04G40880
N
0.744
GLYMA06G13960
Glycine max
GLYMA06G13960
N
0.744
Gorai.004G204600
Gossypium raimondii
Gorai.004G204600
I
0.721
Gorai.008G241800
Gossypium raimondii
Gorai.008G241800
I
0.721
GRF11
Oryza sativa
OS07G0467500
N
0.930
GRMZM2G004619
Zea mays
GRMZM2G004619
N
0.930
GRMZM2G067743
Zea mays
GRMZM2G067743
I
0.850
GRMZM2G096709
Zea mays
GRMZM2G096709
N
0.907
GRMZM5G893117
Zea mays
GRMZM5G893117
I
1.000
GSMUA_Achr11G21590_001
Musa acuminata
GSMUA_Achr11G21590_001
I
0.721
GSMUA_Achr5G20170_001
Musa acuminata
GSMUA_Achr5G20170_001
I
0.721
GSMUA_Achr8G12060_001
Musa acuminata
GSMUA_Achr8G12060_001
N
0.767
LPERR07G11440
Leersia perrieri
LPERR07G11440
N
0.930
MLOC_70581
Hordeum vulgare
MLOC_70581
N
0.951
OB02G35150
Oryza brachyantha
OB02G35150
N
0.704
OB03G39940
Oryza brachyantha
OB03G39940
I
0.704
OB07G19720
Oryza brachyantha
OB07G19720
N
0.930
OBART07G13680
Oryza barthii
OBART07G13680
N
0.930
OGLUM07G12780
Oryza glumaepatula
OGLUM07G12780
N
0.930
OLONG_025015
Oryza longistaminata
OLONG_025015
N
0.930
OMERI07G10850
Oryza meridionalis
OMERI07G10850
N
0.930
OMERI08G17030
Oryza meridionalis
OMERI08G17030
N
0.930
ONIVA07G11690
Oryza nivara
ONIVA07G11690
N
0.930
OPUNC07G12320
Oryza punctata
OPUNC07G12320
N
0.930
ORGLA07G0115500
Oryza glaberrima
ORGLA07G0115500
N
0.930
ORUFI07G13880
Oryza rufipogon
ORUFI07G13880
N
0.930
Pavir.Aa00919
Panicum virgatum
Pavir.Aa00919
I
0.944
Pavir.Ba01449
Panicum virgatum
Pavir.Ba01449
N
1.000
Pavir.Bb02610
Panicum virgatum
Pavir.Bb02610
N
1.000
Pm005437
Prunus mume
Pm005437
N
0.721
PRUPE_ppa019623mg
Prunus persica
PRUPE_ppa019623mg
N
0.721
Sb02g032860
Sorghum bicolor
Sb02g032860
N
0.976
TCM_016120
Theobroma cacao
TCM_016120
I
0.721
Traes_2AS_CA4D79100
Triticum aestivum
Traes_2AS_CA4D79100
N
0.951
Traes_2BS_E3CBE0B73
Triticum aestivum
Traes_2BS_E3CBE0B73
N
0.951
Traes_2DL_243DA9D84
Triticum aestivum
Traes_2DL_243DA9D84
N
0.951
Traes_6BL_7462E6F9B
Triticum aestivum
Traes_6BL_7462E6F9B
I
1.000
TRIUR3_26160
Triticum urartu
TRIUR3_26160
N
0.951