CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.C00823
(
Eucalyptus grandis
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08879 (WRC)
IPR014977
Eucgr.C00823
T351598_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AtGRF6
M02545_2.00
Arabidopsis thaliana
NNNNYDNN
NNHRNNNN
PBM
Weirauch et al.(2014)
pTH7356
0.860
0.860
AtGRF6
M07369_2.00
Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN
Dap-seq
OMalley et al.(2016)
AtGRF6_col_a
0.860
0.860
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.C00823.1
WRC
85
127
PEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE
Links
Other
WRC
family TFs
Other
Eucalyptus grandis
TFs
575 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB03286.1
Alternaria brassicicola
AB03286.1
I
ACRE_034210
Acremonium chrysogenum
ACRE_034210
I
ARB_03643
Arthroderma benhamiae
ARB_03643
I
AUEXF2481DRAFT_5486
Aureobasidium subglaciale
AUEXF2481DRAFT_5486
I
BAUCODRAFT_249790
Baudoinia compniacensis
BAUCODRAFT_249790
I
BBA_06988
Beauveria bassiana
BBA_06988
I
Bcin15g00200
Botrytis cinerea
Bcin15g00200
I
CADAORAG00008810
Aspergillus oryzae
CADAORAG00008810
I
CCM_01128
Cordyceps militaris
CCM_01128
I
CFIO01_11126
Colletotrichum fioriniae
CFIO01_11126
I
CGGC5_2437
Colletotrichum gloeosporioides
CGGC5_2437
I
CH063_05360
Colletotrichum higginsianum
CH063_05360
I
CMQ_566
Grosmannia clavigera
CMQ_566
I
Cob_01611
Colletotrichum orbiculare
Cob_01611
I
COCC4DRAFT_163657
Bipolaris maydis
COCC4DRAFT_163657
I
COCCADRAFT_112191
Bipolaris zeicola
COCCADRAFT_112191
I
COCMIDRAFT_80851
Bipolaris oryzae
COCMIDRAFT_80851
I
COCSADRAFT_93076
Bipolaris sorokiniana
COCSADRAFT_93076
I
COCVIDRAFT_31288
Bipolaris victoriae
COCVIDRAFT_31288
I
CPUR_01747
Claviceps purpurea
CPUR_01747
I
CSUB01_01401
Colletotrichum sublineola
CSUB01_01401
I
CTHT_0003600
Chaetomium thermophilum
CTHT_0003600
I
DOTSEDRAFT_164596
Dothistroma septosporum
DOTSEDRAFT_164596
I
estExt_fgenesh1_pg.C_10877
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_10877
I
estExt_fgenesh3_kg.C_40226
Neurospora discreta
estExt_fgenesh3_kg.C_40226
I
estExt_Genewise1.C_30429
Cochliobolus heterostrophus C5
estExt_Genewise1.C_30429
I
estExt_Genewise1Plus.C_chr_12913
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_12913
I
EURHEDRAFT_518989
Aspergillus ruber
EURHEDRAFT_518989
I
EV44_g2223
Erysiphe necator
EV44_g2223
I
F503_06775
Ophiostoma piceae uamh
F503_06775
I
FFUJ_01507
Fusarium fujikuroi
FFUJ_01507
I
FGRRES_01313
Fusarium graminearum
FGRRES_01313
I
FOXG_00073
Fusarium oxysporum
FOXG_00073
I
FPSE_03349
Fusarium pseudograminearum
FPSE_03349
I
FVEG_01443
Fusarium verticillioides
FVEG_01443
I
GGTG_01216
Gaeumannomyces graminis
GGTG_01216
I
GLRG_03942
Colletotrichum graminicola
GLRG_03942
I
GMDG_08213
Pseudogymnoascus destructans
GMDG_08213
I
GSTUM_00001612001
Tuber melanosporum
GSTUM_00001612001
I
H101_02270
Trichophyton interdigitale
H101_02270
I
H102_06775
Trichophyton rubrum
H102_06775
I
H105_06815
Trichophyton soudanense
H105_06815
I
HMPREF1541_10536
Cyphellophora europaea
HMPREF1541_10536
N
HMPREF1624_07695
Sporothrix schenckii
HMPREF1624_07695
I
LEMA_P026860.1
Leptosphaeria maculans
LEMA_P026860.1
I
M437DRAFT_76008
Aureobasidium melanogenum
M437DRAFT_76008
I
M438DRAFT_282148
Aureobasidium pullulans
M438DRAFT_282148
I
MAC_07148
Metarhizium acridum
MAC_07148
I
MAJ_04559
Metarhizium majus
MAJ_04559
I
MAM_03661
Metarhizium album
MAM_03661
I
MANI_013653
Metarhizium anisopliae
MANI_013653
I
MAPG_08236
Magnaporthe poae
MAPG_08236
I
MBM_00160
Marssonina brunnea
MBM_00160
I
MBR_06029
Metarhizium brunneum
MBR_06029
I
MGG_00342
Magnaporthe oryzae
MGG_00342
I
MGU_06448
Metarhizium guizhouense
MGU_06448
I
MPH_10926
Macrophomina phaseolina
MPH_10926
I
MYCFIDRAFT_86007
Pseudocercospora fijiensis
MYCFIDRAFT_86007
I
Mycgr3G66896
Zymoseptoria tritici
Mycgr3G66896
I
MYCTH_2297066
Myceliophthora thermophila
MYCTH_2297066
I
NCU07379
Neurospora crassa
NCU07379
D
NEUTE1DRAFT_105272
Neurospora tetrasperma
NEUTE1DRAFT_105272
I
OCS_06036
Ophiocordyceps sinensis
OCS_06036
I
OIDMADRAFT_202703
Oidiodendron maius
OIDMADRAFT_202703
I
PDIP_02990
Penicillium digitatum
PDIP_02990
I
PFICI_01432
Pestalotiopsis fici
PFICI_01432
I
PITC_020790
Penicillium italicum
PITC_020790
I
PODANS_1_17900
Podospora anserina
PODANS_1_17900
I
PTRG_07994
Pyrenophora triticirepentis
PTRG_07994
I
PTT_09501
Pyrenophora teres
PTT_09501
I
PV09_01645
Verruconis gallopava
PV09_01645
I
PV10_03189
Exophiala mesophila
PV10_03189
I
PVAR5_8450
Byssochlamys spectabilis
PVAR5_8450
N
S40285_05984
Stachybotrys chlorohalonata
S40285_05984
I
S40288_06814
Stachybotrys chartarum
S40288_06814
I
SBOR_9585
Sclerotinia borealis
SBOR_9585
I
SEPMUDRAFT_103885
Sphaerulina musiva
SEPMUDRAFT_103885
I
SETTUDRAFT_169120
Setosphaeria turcica
SETTUDRAFT_169120
I
SMAC_00328
Sordaria macrospora
SMAC_00328
I
SNOG_04391
Stagonospora nodorum
SNOG_04391
I
SPBR_07829
Sporothrix brasiliensis
SPBR_07829
I
TEQG_00005
Trichophyton equinum
TEQG_00005
I
TESG_03658
Trichophyton tonsurans
TESG_03658
I
THITE_2112534
Thielavia terrestris
THITE_2112534
I
TRIATDRAFT_301441
Trichoderma atroviride
TRIATDRAFT_301441
I
TRIREDRAFT_57840
Trichoderma reesei
TRIREDRAFT_57840
I
TRIVIDRAFT_227332
Trichoderma virens
TRIVIDRAFT_227332
I
TRV_01964
Trichophyton verrucosum
TRV_01964
I
U727_00431281371
Penicillium solitum
U727_00431281371
I
UCREL1_941
Eutypa lata
UCREL1_941
I
UCRPA7_4041
Togninia minima
UCRPA7_4041
I
VDAG_03214
Verticillium dahliae
VDAG_03214
I
VDBG_06054
Verticillium albo atrum
VDBG_06054
I
VDBG_06054
Verticillium alfalfae
VDBG_06054
I
VHEMI02403
Torrubiella hemipterigena
VHEMI02403
I
W97_01199
Coniosporium apollinis
W97_01199
I
Z517_02456
Fonsecaea pedrosoi
Z517_02456
I