gene13517-v1.0-hybrid (Fragaria vesca)
WRC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF08879 (WRC) IPR014977 gene13517-v1.0-hybrid T351625_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtGRF6
M02545_2.00 		Arabidopsis thaliana
NNNNYDNN
NNHRNNNN		 PBM
Weirauch et al.(2014)
pTH7356 		0.744 0.744
AtGRF6
M07369_2.00 		Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN		 Dap-seq
OMalley et al.(2016)
AtGRF6_col_a 		0.744 0.744
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna13517.1-v1.0-hybrid WRC 76 118

Links

Other WRC family TFs
Other Fragaria vesca TFs

583 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_07823 Capronia coronata A1O1_07823 I 0.000
A1O3_10149 Capronia epimyces A1O3_10149 I 0.000
A1O5_05843 Cladophialophora psammophila A1O5_05843 I 0.000
A1O5_07574 Cladophialophora psammophila A1O5_07574 I 0.000
A1O7_10006 Cladophialophora yegresii A1O7_10006 I 0.000
A1O9_08861 Exophiala aquamarina A1O9_08861 I 0.000
ACLA_081690 Aspergillus clavatus CADACLAG00007603 I 0.000
AGABI2DRAFT_192345 Agaricus bisporus AGABI2DRAFT_192345 I 0.000
AGABI2DRAFT_46752 Agaricus bisporus AGABI2DRAFT_46752 N 0.000
ANIA_05218 Aspergillus nidulans CADANIAG00003217 I 0.000
AOL_s00110g25 Arthrobotrys oligospora AOL_s00110g25 I 0.000
ATEG_03672 Aspergillus terreus CADATEAG00009127 I 0.000
BAUCODRAFT_33466 Baudoinia compniacensis BAUCODRAFT_33466 I 0.000
BBA_04990 Beauveria bassiana BBA_04990 I 0.000
Bcin04g06790 Botrytis cinerea Bcin04g06790 I 0.000
BN946_scf185042.g81 Trametes cinnabarina BN946_scf185042.g81 I 0.000
BOTBODRAFT_25579 Botryobasidium botryosum BOTBODRAFT_25579 N 0.000
CADAFLAG00001559 Aspergillus flavus CADAFLAG00001559 I 0.000
CADANGAG00006161 Aspergillus niger CADANGAG00006161 I 0.000
CADAORAG00003410 Aspergillus oryzae CADAORAG00003410 I 0.000
CC1G_03237 Coprinopsis cinerea CC1G_03237 I 0.000
CC1G_13211 Coprinopsis cinerea CC1G_13211 N 0.000
CERSUDRAFT_117789 Ceriporiopsis subvermispora CERSUDRAFT_117789 I 0.000
CIMG_04172 Coccidioides immitis CIMG_04172 I 0.000
CMQ_3347 Grosmannia clavigera CMQ_3347 I 0.000
CNJ02250 Cryptococcus neoformans CNJ02250 N 0.000
Cob_07996 Colletotrichum orbiculare Cob_07996 I 0.000
CPC735_002490 Coccidioides posadasii CPC735_002490 I 0.000
CY34DRAFT_797070 Suillus luteus CY34DRAFT_797070 N 0.000
CY34DRAFT_799751 Suillus luteus CY34DRAFT_799751 I 0.000
cys-3 Neurospora crassa NCU03536 D 0.000
DACRYDRAFT_21032 Dacryopinax sp DACRYDRAFT_21032 N 0.000
DACRYDRAFT_34514 Dacryopinax sp DACRYDRAFT_34514 N 0.000
DRE_04846 Drechslerella stenobrocha DRE_04846 I 0.000
E5Q_01003 Mixia osmundae E5Q_01003 I 0.000
EPUS_08958 Endocarpon pusillum EPUS_08958 I 0.000
estExt_fgenesh1_pg.C_20710 Cryphonectria parasitica estExt_fgenesh1_pg.C_20710 I 0.000
estExt_fgenesh1_pg.C_sca_3_chr4_2_00209 Nectria haematococca estExt_fgenesh1_pg.C_sca_3_chr4_2_00209 I 0.000
estExt_fgeneshPB_pg.C_60206 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_60206 I 0.000
EURHEDRAFT_377850 Aspergillus ruber EURHEDRAFT_377850 I 0.000
EV44_g2242 Erysiphe necator EV44_g2242 I 0.000
e_gw1.00009.376.1 Aspergillus carbonarius e_gw1.00009.376.1 I 0.000
e_gw1.1.2325.1 Heterobasidion annosum e_gw1.1.2325.1 N 0.000
F503_01948 Ophiostoma piceae uamh F503_01948 I 0.000
fgenesh1_pg.C_scaffold_11000483 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_11000483 N 0.000
FGRRES_05171 Fusarium graminearum FGRRES_05171 I 0.000
FIBRA_01065 Fibroporia radiculosa FIBRA_01065 I 0.000
FIBRA_02377 Fibroporia radiculosa FIBRA_02377 N 0.000
FOMPIDRAFT_1045923 Fomitopsis pinicola FOMPIDRAFT_1045923 I 0.000
FOMPIDRAFT_43818 Fomitopsis pinicola FOMPIDRAFT_43818 N 0.000
FPSE_06572 Fusarium pseudograminearum FPSE_06572 I 0.000
G647_08273 Cladophialophora carrionii G647_08273 I 0.000
GALMADRAFT_279895 Galerina marginata GALMADRAFT_279895 I 0.000
GALMADRAFT_61295 Galerina marginata GALMADRAFT_61295 N 0.000
GALMADRAFT_82940 Galerina marginata GALMADRAFT_82940 N 0.000
GLOTRDRAFT_110417 Gloeophyllum trabeum GLOTRDRAFT_110417 I 0.000
GLOTRDRAFT_90337 Gloeophyllum trabeum GLOTRDRAFT_90337 N 0.000
GMDG_05082 Pseudogymnoascus destructans GMDG_05082 I 0.000
GSTUM_00004031001 Tuber melanosporum GSTUM_00004031001 I 0.000
GSTUM_00008609001 Tuber melanosporum GSTUM_00008609001 I 0.000
gw1.3.1805.1 Heterobasidion annosum gw1.3.1805.1 I 0.000
GYMLUDRAFT_446672 Gymnopus luxurians GYMLUDRAFT_446672 N 0.000
H072_10866 Dactylellina haptotyla H072_10866 I 0.000
HETIRDRAFT_146332 Heterobasidion irregulare HETIRDRAFT_146332 I 0.000
HETIRDRAFT_244485 Heterobasidion irregulare HETIRDRAFT_244485 N 0.000
HMPREF1120_08717 Exophiala dermatitidis HMPREF1120_08717 I 0.000
HMPREF1541_02767 Cyphellophora europaea HMPREF1541_02767 I 0.000
HMPREF1624_03651 Sporothrix schenckii HMPREF1624_03651 I 0.000
JAAARDRAFT_37210 Jaapia argillacea JAAARDRAFT_37210 I 0.000
K437DRAFT_226706 Tilletiaria anomala K437DRAFT_226706 I 0.000
K443DRAFT_671152 Laccaria amethystina K443DRAFT_671152 I 0.000
L804_04999 Cryptococcus gattii L804_04999 N 0.000
LACBIDRAFT_239654 Laccaria bicolor LACBIDRAFT_239654 N 0.000
LACBIDRAFT_301720 Laccaria bicolor LACBIDRAFT_301720 N 0.000
LACBIDRAFT_313869 Laccaria bicolor LACBIDRAFT_313869 I 0.000
LEMA_P046430.1 Leptosphaeria maculans LEMA_P046430.1 I 0.000
M404DRAFT_12327 Pisolithus tinctorius M404DRAFT_12327 I 0.000
M407DRAFT_35342 Tulasnella calospora M407DRAFT_35342 N 0.000
M413DRAFT_42693 Hebeloma cylindrosporum M413DRAFT_42693 N 0.000
M413DRAFT_66275 Hebeloma cylindrosporum M413DRAFT_66275 I 0.000
M413DRAFT_7311 Hebeloma cylindrosporum M413DRAFT_7311 N 0.000
M7I_7549 Glarea lozoyensis M7I_7549 I 0.000
MAM_00920 Metarhizium album MAM_00920 I 0.000
MAPG_10034 Magnaporthe poae MAPG_10034 I 0.000
MGG_14561 Magnaporthe oryzae MGG_14561 I 0.000
Moror_16484 Moniliophthora roreri Moror_16484 I 0.000
MPER_02131 Moniliophthora perniciosa MPER_02131 I 0.000
MPH_01173 Macrophomina phaseolina MPH_01173 I 0.000
MYCFIDRAFT_214535 Pseudocercospora fijiensis MYCFIDRAFT_214535 I 0.000
MYCTH_57777 Myceliophthora thermophila MYCTH_57777 I 0.000
NechaG99958 Fusarium solani NechaG99958 I 0.000
OIDMADRAFT_101511 Oidiodendron maius OIDMADRAFT_101511 I 0.000
PAXRUDRAFT_389418 Paxillus rubicundulus PAXRUDRAFT_389418 I 0.000
PAXRUDRAFT_823784 Paxillus rubicundulus PAXRUDRAFT_823784 N 0.000
Pc18g06160 Penicillium chrysogenum Pc18g06160 I 0.000
PCH_Pc18g06160 Penicillium rubens PCH_Pc18g06160 I 0.000
PDE_05199 Penicillium oxalicum PDE_05199 I 0.000
PDIP_70460 Penicillium digitatum PDIP_70460 I 0.000
PEX1_101830 Penicillium expansum PEX1_101830 I 0.000
PFICI_11424 Pestalotiopsis fici PFICI_11424 I 0.000
PFL1_03384 Pseudozyma flocculosa PFL1_03384 I 0.000
PHACADRAFT_258748 Phanerochaete carnosa PHACADRAFT_258748 I 0.000
PHLGIDRAFT_454069 Phlebiopsis gigantea PHLGIDRAFT_454069 I 0.000
PHSY_007144 Pseudozyma hubeiensis PHSY_007144 I 0.000
PIIN_07436 Piriformospora indica PIIN_07436 N 0.000
PILCRDRAFT_5774 Piloderma croceum PILCRDRAFT_5774 N 0.000
PILCRDRAFT_98825 Piloderma croceum PILCRDRAFT_98825 I 0.000
PITC_087850 Penicillium italicum PITC_087850 I 0.000
PLEOSDRAFT_1089335 Pleurotus ostreatus PLEOSDRAFT_1089335 I 0.000
PLEOSDRAFT_165977 Pleurotus ostreatus PLEOSDRAFT_165977 N 0.000
PMAA_027760 Talaromyces marneffei PMAA_027760 I 0.000
PMAA_027760 Penicillium marneffei PMAA_027760 I 0.000
PODANS_6_4490 Podospora anserina PODANS_6_4490 I 0.000
POSPLDRAFT_42534 Postia placenta POSPLDRAFT_42534 I 0.000
PV04_10539 Capronia semiimmersa PV04_10539 I 0.000
PV05_03362 Exophiala xenobiotica PV05_03362 I 0.000
PV06_08450 Exophiala oligosperma PV06_08450 I 0.000
PV07_12300 Cladophialophora immunda PV07_12300 I 0.000
PV08_06754 Exophiala spinifera PV08_06754 I 0.000
PV09_03803 Verruconis gallopava PV09_03803 I 0.000
PV11_06042 Exophiala sideris PV11_06042 I 0.000
PVAR5_4159 Byssochlamys spectabilis PVAR5_4159 I 0.000
RO3G_16530 Rhizopus oryzae RO3G_16530 I 0.000
S40285_02008 Stachybotrys chlorohalonata S40285_02008 I 0.000
S40288_01688 Stachybotrys chartarum S40288_01688 I 0.000
SCHCODRAFT_104239 Schizophyllum commune SCHCODRAFT_104239 N 0.000
SCHCODRAFT_257931 Schizophyllum commune SCHCODRAFT_257931 I 0.000
SCHCODRAFT_258832 Schizophyllum commune SCHCODRAFT_258832 I 0.000
SERLA73DRAFT_176185 Serpula lacrymans SERLA73DRAFT_176185 N 0.000
SERLA73DRAFT_180850 Serpula lacrymans SERLA73DRAFT_180850 I 0.000
SMAC_07774 Sordaria macrospora SMAC_07774 I 0.000
SNOG_04964 Stagonospora nodorum SNOG_04964 I 0.000
SNOG_04964 Phaeosphaeria nodorum SNOG_04964 I 0.000
SOCG_04149 Schizosaccharomyces octosporus SOCG_04149 I 0.000
SPBR_02042 Sporothrix brasiliensis SPBR_02042 I 0.000
SPOG_00393 Schizosaccharomyces cryophilus SPOG_00393 I 0.000
THITE_75012 Thielavia terrestris THITE_75012 I 0.000
TSTA_070990 Talaromyces stipitatus TSTA_070990 I 0.000
U727_00431304101 Penicillium solitum U727_00431304101 I 0.000
UCRNP2_8660 Neofusicoccum parvum UCRNP2_8660 I 0.000
UCRPA7_8213 Togninia minima UCRPA7_8213 I 0.000
UREG_05605 Uncinocarpus reesii UREG_05605 I 0.000
V499_06269 Pseudogymnoascus pannorum V499_06269 I 0.000
V565_038380 Rhizoctonia solani V565_038380 N 0.000
VDAG_04042 Verticillium dahliae VDAG_04042 I 0.000
VHEMI00216 Torrubiella hemipterigena VHEMI00216 I 0.000
Z517_12228 Fonsecaea pedrosoi Z517_12228 I 0.000
Z518_06161 Rhinocladiella mackenziei Z518_06161 I 0.000
Z519_04890 Cladophialophora bantiana Z519_04890 I 0.000
Z519_06138 Cladophialophora bantiana Z519_06138 I 0.000