CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GSMUA_Achr4G03660_001 *(Musa acuminata)* WRKY
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03106 (WRKY)	IPR003657	GSMUA_Achr4G03660_001	T352964_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
WRKY21 M02553_2.00	Arabidopsis thaliana	NNRGTCAAMN	NKTTGACYNN	PBM Weirauch et al.(2014) pTH7422	0.887	0.881
WRKY21 M07389_2.00	Arabidopsis thaliana	HAAAGTCAACNNH	DNNGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_colamp_a	0.887	0.881
WRKY21 M07390_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_col	0.887	0.881
Q40828_PETCR M11467_2.00	Petroselinum crispum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY_Q2	0.881	0.881
WRKY11 M02559_2.00	Arabidopsis thaliana	NDGTCAAHNN	NNDTTGACHN	PBM Weirauch et al.(2014) pTH8091	0.875	0.814
WRKY11 M07415_2.00	Arabidopsis thaliana	NHAAAGTCAACBNH	DNVGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY11_col_a	0.875	0.814
WRKY11 M11464_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY11_Q2	0.875	0.814
WRKY17 M02550_2.00	Arabidopsis thaliana	NNDGTCAAHN	NDTTGACHNN	PBM Weirauch et al.(2014) pTH8088	0.875	0.814
WRKY17 M07385_2.00	Arabidopsis thaliana	NHAAAGTCAACRNN	NNYGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY17_col_a	0.875	0.814
WRKY17 M07386_2.00	Arabidopsis thaliana	NMAAAGTCAACGN	NCGTTGACTTTKN	Dap-seq OMalley et al.(2016) WRKY17_colamp_a	0.875	0.814
WRKY15 M02549_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Weirauch et al.(2014) pTH7602	0.874	0.831
WRKY15 M07383_2.00	Arabidopsis thaliana	AAAAGTCAACKN	NMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY15_colamp_a	0.874	0.831
WRKY15 M07384_2.00	Arabidopsis thaliana	NWAAGTCAACB	VGTTGACTTWN	Dap-seq OMalley et al.(2016) WRKY15_col_b	0.874	0.831
WRKY7 M07412_2.00	Arabidopsis thaliana	NNDDDNNNNMAAAGTCAACGV	BCGTTGACTTTKNNNNHHHNN	Dap-seq OMalley et al.(2016) WRKY7_colamp_a	0.873	0.814
WRKY7 M07413_2.00	Arabidopsis thaliana	NAAAAGTCAACKNN	NNMGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY7_col	0.873	0.814
WRKY65 M07372_2.00	Arabidopsis thaliana	NWWAGTCAACG	CGTTGACTWWN	Dap-seq OMalley et al.(2016) WRKY65_col_a	0.861	0.695
WRKY65 M07373_2.00	Arabidopsis thaliana	NAAAGTCAACGN	NCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY65_colamp_a	0.861	0.695
WRKY14 M00731_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Chang et al.(2013) pTH7570	0.853	0.678
WRKY14 M07375_2.00	Arabidopsis thaliana	NAAAGTCAACGNN	NNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_col_a	0.853	0.678
WRKY14 M07376_2.00	Arabidopsis thaliana	NAAAGTCAACGNH	DNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_colamp_a	0.853	0.678
WRKY27 M02566_2.00	Arabidopsis thaliana	NNGTCHDNN	NNHDGACNN	PBM Weirauch et al.(2014) pTH8188	0.852	0.644
WRKY27 M07430_2.00	Arabidopsis thaliana	MAAAGTCAACKNH	DNMGTTGACTTTK	Dap-seq OMalley et al.(2016) WRKY27_col_a	0.852	0.644
WRKY27 M07431_2.00	Arabidopsis thaliana	HAAAGTCAACKNH	DNMGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY27_colamp_a	0.852	0.644
WRKY22 M02557_2.00	Arabidopsis thaliana	NNNKTMHDNN	NNHDKAMNNN	PBM Weirauch et al.(2014) pTH7320	0.850	0.661
WRKY22 M07400_2.00	Arabidopsis thaliana	AAAAGTCAACKNH	DNMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY22_colamp_a	0.850	0.661
WRKY22 M07401_2.00	Arabidopsis thaliana	NAAAGTCAACKNH	DNMGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY22_col	0.850	0.661
WRKY29 M02558_2.00	Arabidopsis thaliana	NNNGTCHDNN	NNHDGACNNN	PBM Weirauch et al.(2014) pTH9604	0.843	0.610
WRKY29 M07410_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY29_col_a	0.843	0.610
WRKY29 M07411_2.00	Arabidopsis thaliana	HWWAGTCAAMDNN	NNHKTTGACTWWD	Dap-seq OMalley et al.(2016) WRKY29_colamp_a	0.843	0.610
WRKY48 M02565_2.00	Arabidopsis thaliana	NNVGTCADNN	NNHTGACBNN	PBM Weirauch et al.(2014) pTH7552	0.824	0.542
WRKY28 M07406_2.00	Arabidopsis thaliana	HAAAGTCAAMNNH	DNNKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY28_col_a	0.822	0.542
WRKY28 M07407_2.00	Arabidopsis thaliana	VAAAGTCAAMG	CKTTGACTTTB	Dap-seq OMalley et al.(2016) WRKY28_colamp_a	0.822	0.542
WRKY8 M02564_2.00	Arabidopsis thaliana	NRGTCAAHN	NDTTGACYN	PBM Weirauch et al.(2014) pTH7554	0.822	0.525
WRKY8 M07428_2.00	Arabidopsis thaliana	NAAAAGTCAACRNHW	WDNYGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY8_colamp_a	0.822	0.525
WRKY8 M07429_2.00	Arabidopsis thaliana	NNVAAAGTCAACRNH	DNYGTTGACTTTBNN	Dap-seq OMalley et al.(2016) WRKY8_col	0.822	0.525
ZAP1 M00982_2.00	Arabidopsis thaliana	NRGTCAAN	NTTGACYN	PBM Lindemose et al.(2014) WRKY1	0.820	0.610
fgenesh1_pg.C_Chr_11.0001000193 M02570_2.00	Ostreococcus tauri	NRGTCARNN	NNYTGACYN	PBM Weirauch et al.(2014) pTH9432	0.818	0.559
WRKY71 M07374_2.00	Arabidopsis thaliana	HAAAGTCAAMN	NKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY71_col_a	0.818	0.525
WRKY23 M02556_2.00	Arabidopsis thaliana	RGTCAACG	CGTTGACY	PBM Weirauch et al.(2014) pTH7387	0.817	0.508
WRKY23 M01089_2.00	Arabidopsis thaliana	NRGTCAAM	KTTGACYN	PBM Sullivan et al.(2014) pTH7671	0.817	0.508
WRKY57 M02547_2.00	Arabidopsis thaliana	NNRGTCAAHN	NDTTGACYNN	PBM Weirauch et al.(2014) pTH7917	0.816	0.508
WRKY12 M00898_2.00	Arabidopsis thaliana	NHGGTCAACNN	NNGTTGACCDN	PBM Franco-Zorrilla et al.(2014) WRKY12	0.811	0.542
WRKY50 M07424_2.00	Arabidopsis thaliana	NNAAAAGTCAAMN	NKTTGACTTTTNN	Dap-seq OMalley et al.(2016) WRKY50_col_a	0.809	0.576
WRKY50 M07425_2.00	Arabidopsis thaliana	NWAAGTCAANN	NNTTGACTTWN	Dap-seq OMalley et al.(2016) WRKY50_colamp_a	0.809	0.576
For this family, TFs with SR scores > 0.808* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GSMUA_Achr4P03660_001	WRKY	203	261	ADDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCVEDPTMLMVTYEGEHNHA

Links
Other WRKY family TFs
Other *Musa acuminata* TFs

1761 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
Aan_R007397	Calypte anna	Aan_R007397	I	0.000
Afo_R006360	Aptenodytes forsteri	Afo_R006360	I	0.000
Alligator_sinensis_CCG006744.1	Alligator sinensis	Alligator_sinensis_CCG006744.1	I	0.000
Brh_R013202	Buceros rhinoceros	Brh_R013202	I	0.000
ENSAMEG00000000192	Ailuropoda melanoleuca	ENSAMEG00000000192	I	0.000
ENSAPLG00000006384	Anas platyrhynchos	ENSAPLG00000006384	I	0.000
ENSCPOG00000003269	Cavia porcellus	ENSCPOG00000003269	I	0.000
ENSCSAG00000016522	Chlorocebus sabaeus	ENSCSAG00000016522	I	0.000
ENSDORG00000003797	Dipodomys ordii	ENSDORG00000003797	I	0.000
ENSFALG00000009227	Ficedula albicollis	ENSFALG00000009227	I	0.000
ENSLACG00000017771	Latimeria chalumnae	ENSLACG00000017771	I	0.000
ENSMICG00000008878	Microcebus murinus	ENSMICG00000008878	I	0.000
ENSMPUG00000002301	Mustela putorius furo	ENSMPUG00000002301	I	0.000
ENSNLEG00000016679	Nomascus leucogenys	ENSNLEG00000016679	I	0.000
ENSOARG00000004333	Ovis aries	ENSOARG00000004333	I	0.000
ENSP00000371661	Macaca fascicularis	ENSP00000371661	I	0.000
ENSP00000371661-D1	Bos grunniens	ENSP00000371661-D1	I	0.000
ENSPANG00000024022	Papio anubis	ENSPANG00000024022	I	0.000
ENSPSIG00000017051	Pelodiscus sinensis	ENSPSIG00000017051	I	0.000
ENSSHAG00000015746	Sarcophilus harrisii	ENSSHAG00000015746	I	0.000
ENSSTOG00000000960	Ictidomys tridecemlineatus	ENSSTOG00000000960	I	0.000
Gfo_R010322	Geospiza fortis	Gfo_R010322	I	0.000
LCORL	Vicugna pacos	ENSVPAG00000010356	I	0.000
LCORL	Tursiops truncatus	ENSTTRG00000016951	I	0.000
LCORL	Taeniopygia guttata	ENSTGUG00000009625	I	0.000
lcorl	Danio rerio	ENSDARG00000070098	I	0.000
LCORL	Sus scrofa	ENSSSCG00000008748	I	0.000
LCORL	Callithrix jacchus	ENSCJAG00000012800	I	0.000
LCORL	Canis familiaris	ENSCAFG00000016672	I	0.000
LCORL	Pteropus vampyrus	ENSPVAG00000013601	I	0.000
LCORL	Bos taurus	ENSBTAG00000046561	I	0.000
LCORL	Pan troglodytes	ENSPTRG00000015943	I	0.000
LCORL	Homo sapiens	ENSG00000178177	D	0.000
LCORL	Otolemur garnettii	ENSOGAG00000005593	I	0.000
LCORL	Felis catus	ENSFCAG00000029474	I	0.000
LCORL	Gallus gallus	ENSGALG00000014421	I	0.000
LCORL	Gorilla gorilla	ENSGGOG00000014894	I	0.000
LCORL	Erinaceus europaeus	ENSEEUG00000000419	I	0.000
LCORL	Loxodonta africana	ENSLAFG00000009691	I	0.000
LCORL	Meleagris gallopavo	ENSMGAG00000012554	I	0.000
LCORL	Equus caballus	ENSECAG00000000648	I	0.000
LCORL	Myotis lucifugus	ENSMLUG00000013781	I	0.000
LCORL	Monodelphis domestica	ENSMODG00000000757	I	0.000
LCORL	Dasypus novemcinctus	ENSDNOG00000001545	I	0.000
Lcorl	Mus musculus	ENSMUSG00000015882	I	0.000
LCORL	Anolis carolinensis	ENSACAG00000002012	I	0.000
LCORL	Oryctolagus cuniculus	ENSOCUG00000006802	I	0.000
LCORL	Procavia capensis	ENSPCAG00000007105	I	0.000
Myotis_brandtii_LCORL_10024397	Myotis brandtii	Myotis_brandtii_LCORL_10024397	I	0.000
Ogr00836	Ophisaurus gracilis	Ogr00836	I	0.000
Pvit_18026	Pogona vitticeps	Pvit_18026	I	0.000
Tal_R001804	Tyto alba	Tal_R001804	I	0.000

GSMUA_Achr4G03660_001 (Musa acuminata) WRKY

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1761 Related TFs

GSMUA_Achr4G03660_001 **(Musa acuminata)
WRKY**