CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA05G27990
(
Oryza nivara
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
ONIVA05G27990
T353833_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY42
M07404_2.00
Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN
NNDNNHNNNNHGTTGACYWHN
Dap-seq
OMalley et al.(2016)
WRKY42_col_a
0.900
0.966
WRKY42
M07405_2.00
Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD
HHNDNMGTTGACYWNNNHND
Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a
0.900
0.966
WRKY31
M07408_2.00
Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG
CGTTGACYHNNNNNDNNNN
Dap-seq
OMalley et al.(2016)
WRKY31_col_a
0.897
0.949
WRKY31
M07409_2.00
Arabidopsis thaliana
NHWRGTCAACKNH
DNMGTTGACYWDN
Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a
0.897
0.949
WRKY6
M07377_2.00
Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG
CGTTGACYNDNDHNDNNNH
Dap-seq
OMalley et al.(2016)
WRKY6_col_a
0.897
0.949
WRKY6
M07378_2.00
Arabidopsis thaliana
NNHNWRGTCAACKNH
DNMGTTGACYWNDNN
Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a
0.897
0.949
WRKY47
M00732_2.00
Arabidopsis thaliana
NNRGTCAACKN
NMGTTGACYNN
PBM
Chang et al.(2013)
pTH7913
0.895
0.915
WRKY47
M07402_2.00
Arabidopsis thaliana
WRGTCAAMGNHVDK
MHBDNCKTTGACYW
Dap-seq
OMalley et al.(2016)
WRKY47_col_a
0.895
0.915
WRKY47
M07403_2.00
Arabidopsis thaliana
NNNHWRGTCAACKNHNNNN
NNNNDNMGTTGACYWDNNN
Dap-seq
OMalley et al.(2016)
WRKY47_colamp_a
0.895
0.915
WRKY21
M02553_2.00
Arabidopsis thaliana
NNRGTCAAMN
NKTTGACYNN
PBM
Weirauch et al.(2014)
pTH7422
0.809
0.593
WRKY21
M07389_2.00
Arabidopsis thaliana
HAAAGTCAACNNH
DNNGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_colamp_a
0.809
0.593
WRKY21
M07390_2.00
Arabidopsis thaliana
HAAAGTCAACK
MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_col
0.809
0.593
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA05G27990.1
WRKY
368
426
SDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTVLITTYEGNHNHP
Links
Other
WRKY
family TFs
Other
Oryza nivara
TFs
670 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAH80434
Xenopus laevis
AAH80434
I
Aan_R001091
Calypte anna
Aan_R001091
I
Aan_R004563
Calypte anna
Aan_R004563
I
Aan_R012455
Calypte anna
Aan_R012455
I
Aan_R014661
Calypte anna
Aan_R014661
I
Afo_R003391
Aptenodytes forsteri
Afo_R003391
I
Afo_R003417
Aptenodytes forsteri
Afo_R003417
I
Afo_R006927
Aptenodytes forsteri
Afo_R006927
I
Alligator_sinensis_CCG005377.1
Alligator sinensis
Alligator_sinensis_CCG005377.1
I
Alligator_sinensis_CCG010655.1
Alligator sinensis
Alligator_sinensis_CCG010655.1
I
Alligator_sinensis_CCG014476.1
Alligator sinensis
Alligator_sinensis_CCG014476.1
I
Brh_R002806
Buceros rhinoceros
Brh_R002806
I
Brh_R008277
Buceros rhinoceros
Brh_R008277
I
Brh_R008776
Buceros rhinoceros
Brh_R008776
I
CapteG109027
Capitella teleta
CapteG109027
I
Cmyd_10015813
Chelonia mydas
Cmyd_10015813
I
ENSACAG00000006408
Anolis carolinensis
ENSACAG00000006408
I
ENSACAG00000017915
Anolis carolinensis
ENSACAG00000017915
I
ENSAMEG00000000661
Ailuropoda melanoleuca
ENSAMEG00000000661
I
ENSAMEG00000001865
Ailuropoda melanoleuca
ENSAMEG00000001865
I
ENSAMEG00000004997
Ailuropoda melanoleuca
ENSAMEG00000004997
I
ENSAMEG00000005877
Ailuropoda melanoleuca
ENSAMEG00000005877
I
ENSAMXG00000000621
Astyanax mexicanus
ENSAMXG00000000621
I
ENSAMXG00000005151
Astyanax mexicanus
ENSAMXG00000005151
I
ENSAMXG00000006875
Astyanax mexicanus
ENSAMXG00000006875
I
ENSAMXG00000009345
Astyanax mexicanus
ENSAMXG00000009345
I
ENSAMXG00000015950
Astyanax mexicanus
ENSAMXG00000015950
I
ENSAMXG00000024685
Astyanax mexicanus
ENSAMXG00000024685
I
ENSAPLG00000007333
Anas platyrhynchos
ENSAPLG00000007333
I
ENSAPLG00000008742
Anas platyrhynchos
ENSAPLG00000008742
I
ENSAPLG00000013598
Anas platyrhynchos
ENSAPLG00000013598
I
ENSBTAP00000001222-D1
Bos grunniens
ENSBTAP00000001222-D1
I
ENSBTAP00000005651-D1
Bos grunniens
ENSBTAP00000005651-D1
I
ENSBTAP00000019523-D1
Bos grunniens
ENSBTAP00000019523-D1
I
ENSCHOG00000004807
Choloepus hoffmanni
ENSCHOG00000004807
I
ENSCJAG00000008192
Callithrix jacchus
ENSCJAG00000008192
I
ENSCPOG00000024869
Cavia porcellus
ENSCPOG00000024869
I
ENSCSAG00000002517
Chlorocebus sabaeus
ENSCSAG00000002517
I
ENSCSAG00000005461
Chlorocebus sabaeus
ENSCSAG00000005461
I
ENSCSAG00000014315
Chlorocebus sabaeus
ENSCSAG00000014315
I
ENSCSAG00000014475
Chlorocebus sabaeus
ENSCSAG00000014475
I
ENSDORG00000006328
Dipodomys ordii
ENSDORG00000006328
I
ENSECAG00000014192
Equus caballus
ENSECAG00000014192
I
ENSECAG00000020388
Equus caballus
ENSECAG00000020388
I
ENSEEUG00000005384
Erinaceus europaeus
ENSEEUG00000005384
I
ENSETEG00000006794
Echinops telfairi
ENSETEG00000006794
I
ENSFALG00000003118
Ficedula albicollis
ENSFALG00000003118
I
ENSFALG00000009407
Ficedula albicollis
ENSFALG00000009407
I
ENSFALG00000014896
Ficedula albicollis
ENSFALG00000014896
I
ENSFCAG00000027459
Felis catus
ENSFCAG00000027459
I
ENSFCAG00000028938
Felis catus
ENSFCAG00000028938
I
ENSFCAG00000030694
Felis catus
ENSFCAG00000030694
I
ENSGALG00000001543
Gallus gallus
ENSGALG00000001543
I
ENSGALG00000009277
Gallus gallus
ENSGALG00000009277
I
ENSGALG00000023129
Gallus gallus
ENSGALG00000023129
I
ENSGALG00000027515
Gallus gallus
ENSGALG00000027515
I
ENSGGOG00000001339
Gorilla gorilla
ENSGGOG00000001339
I
ENSGGOG00000023186
Gorilla gorilla
ENSGGOG00000023186
I
ENSGMOG00000005714
Gadus morhua
ENSGMOG00000005714
I
ENSGMOG00000013892
Gadus morhua
ENSGMOG00000013892
I
ENSGMOG00000015284
Gadus morhua
ENSGMOG00000015284
I
ENSGMOG00000017858
Gadus morhua
ENSGMOG00000017858
I
ENSLACG00000015543
Latimeria chalumnae
ENSLACG00000015543
I
ENSLACG00000016784
Latimeria chalumnae
ENSLACG00000016784
I
ENSLACG00000017423
Latimeria chalumnae
ENSLACG00000017423
I
ENSLAFG00000000738
Loxodonta africana
ENSLAFG00000000738
I
ENSLOCG00000006295
Lepisosteus oculatus
ENSLOCG00000006295
I
ENSLOCG00000007161
Lepisosteus oculatus
ENSLOCG00000007161
I
ENSLOCG00000011842
Lepisosteus oculatus
ENSLOCG00000011842
I
ENSLOCG00000013457
Lepisosteus oculatus
ENSLOCG00000013457
I
ENSMEUG00000002348
Macropus eugenii
ENSMEUG00000002348
I
ENSMGAG00000015900
Meleagris gallopavo
ENSMGAG00000015900
I
ENSMICG00000000502
Microcebus murinus
ENSMICG00000000502
I
ENSMLUG00000029480
Myotis lucifugus
ENSMLUG00000029480
I
ENSMMUG00000004542
Macaca mulatta
ENSMMUG00000004542
I
ENSMMUG00000020872
Macaca mulatta
ENSMMUG00000020872
I
ENSMMUG00000023500
Macaca mulatta
ENSMMUG00000023500
I
ENSMPUG00000004851
Mustela putorius furo
ENSMPUG00000004851
I
ENSMPUG00000005890
Mustela putorius furo
ENSMPUG00000005890
I
ENSMPUG00000014022
Mustela putorius furo
ENSMPUG00000014022
I
ENSMPUG00000015332
Mustela putorius furo
ENSMPUG00000015332
I
ENSNLEG00000002594
Nomascus leucogenys
ENSNLEG00000002594
I
ENSNLEG00000014997
Nomascus leucogenys
ENSNLEG00000014997
I
ENSOANG00000004742
Ornithorhynchus anatinus
ENSOANG00000004742
I
ENSOANG00000007689
Ornithorhynchus anatinus
ENSOANG00000007689
I
ENSOANG00000015090
Ornithorhynchus anatinus
ENSOANG00000015090
I
ENSOARG00000000107
Ovis aries
ENSOARG00000000107
I
ENSOARG00000006844
Ovis aries
ENSOARG00000006844
I
ENSOARG00000009550
Ovis aries
ENSOARG00000009550
I
ENSOARG00000016363
Ovis aries
ENSOARG00000016363
I
ENSOCUG00000024694
Oryctolagus cuniculus
ENSOCUG00000024694
I
ENSOCUG00000029547
Oryctolagus cuniculus
ENSOCUG00000029547
I
ENSONIG00000002962
Oreochromis niloticus
ENSONIG00000002962
I
ENSONIG00000004601
Oreochromis niloticus
ENSONIG00000004601
I
ENSONIG00000006178
Oreochromis niloticus
ENSONIG00000006178
I
ENSONIG00000012232
Oreochromis niloticus
ENSONIG00000012232
I
ENSONIG00000012243
Oreochromis niloticus
ENSONIG00000012243
I
ENSOPRG00000010498
Ochotona princeps
ENSOPRG00000010498
I
ENSP00000222753
Macaca fascicularis
ENSP00000222753
I
ENSP00000222753-D1
Bos grunniens
ENSP00000222753-D1
I
ENSP00000290295
Macaca fascicularis
ENSP00000290295
I
ENSP00000376322
Macaca fascicularis
ENSP00000376322
I
ENSPANG00000002383
Papio anubis
ENSPANG00000002383
I
ENSPANG00000012770
Papio anubis
ENSPANG00000012770
I
ENSPANG00000020537
Papio anubis
ENSPANG00000020537
I
ENSPANG00000022884
Papio anubis
ENSPANG00000022884
I
ENSPFOG00000002100
Poecilia formosa
ENSPFOG00000002100
I
ENSPFOG00000002494
Poecilia formosa
ENSPFOG00000002494
I
ENSPFOG00000003827
Poecilia formosa
ENSPFOG00000003827
I
ENSPFOG00000003880
Poecilia formosa
ENSPFOG00000003880
I
ENSPMAG00000000767
Petromyzon marinus
ENSPMAG00000000767
I
ENSPPYG00000004588
Pongo abelii
ENSPPYG00000004588
I
ENSPPYG00000008904
Pongo abelii
ENSPPYG00000008904
I
ENSPPYG00000012956
Pongo abelii
ENSPPYG00000012956
I
ENSPPYG00000017697
Pongo abelii
ENSPPYG00000017697
I
ENSPSIG00000002765
Pelodiscus sinensis
ENSPSIG00000002765
I
ENSPSIG00000003141
Pelodiscus sinensis
ENSPSIG00000003141
I
ENSPSIG00000006373
Pelodiscus sinensis
ENSPSIG00000006373
I
ENSSHAG00000005971
Sarcophilus harrisii
ENSSHAG00000005971
I
ENSSHAG00000013189
Sarcophilus harrisii
ENSSHAG00000013189
I
ENSSHAG00000015915
Sarcophilus harrisii
ENSSHAG00000015915
I
ENSSHAG00000016581
Sarcophilus harrisii
ENSSHAG00000016581
I
ENSSSCG00000021780
Sus scrofa
ENSSSCG00000021780
I
ENSSTOG00000004117
Ictidomys tridecemlineatus
ENSSTOG00000004117
I
ENSSTOG00000014942
Ictidomys tridecemlineatus
ENSSTOG00000014942
I
ENSSTOG00000023781
Ictidomys tridecemlineatus
ENSSTOG00000023781
I
ENSSTOG00000029157
Ictidomys tridecemlineatus
ENSSTOG00000029157
I
ENSTBEG00000007985
Tupaia belangeri
ENSTBEG00000007985
I
ENSTGUG00000008936
Taeniopygia guttata
ENSTGUG00000008936
I
ENSTGUG00000016958
Taeniopygia guttata
ENSTGUG00000016958
I
ENSTRUG00000018251
Takifugu rubripes
ENSTRUG00000018251
I
ENSTSYG00000003737
Tarsius syrichta
ENSTSYG00000003737
I
ENSXMAG00000001062
Xiphophorus maculatus
ENSXMAG00000001062
I
ENSXMAG00000001641
Xiphophorus maculatus
ENSXMAG00000001641
I
ENSXMAG00000013901
Xiphophorus maculatus
ENSXMAG00000013901
I
Gfo_R001376
Geospiza fortis
Gfo_R001376
I
Gfo_R015836
Geospiza fortis
Gfo_R015836
I
HOXA13
Anolis carolinensis
ENSACAG00000010302
I
HOXA13
Bos taurus
ENSBTAG00000014735
I
HOXA13
Canis familiaris
ENSCAFG00000002970
I
HOXA13
Dasypus novemcinctus
ENSDNOG00000047528
I
HOXA13
Homo sapiens
ENSG00000106031
D
HOXA13
Gallus gallus
ENSGALG00000027234
I
HOXA13
Gorilla gorilla
ENSGGOG00000005309
I
HOXA13
Myotis lucifugus
ENSMLUG00000008332
I
HOXA13
Macaca mulatta
ENSMMUG00000013463
I
HOXA13
Monodelphis domestica
ENSMODG00000000449
I
Hoxa13
Mus musculus
ENSMUSG00000038203
D
HOXA13
Ornithorhynchus anatinus
ENSOANG00000009173
I
HOXA13
Otolemur garnettii
ENSOGAG00000028983
I
HOXA13
Pan troglodytes
ENSPTRG00000028643
I
Hoxa13
Rattus norvegicus
ENSRNOG00000053148
I
Hoxa13
Rattus norvegicus
ENSRNOG00000057061
I
HOXA13
Sus scrofa
ENSSSCG00000029666
I
hoxa13
Xenopus tropicalis
XB-GENE-479980
I
hoxa13.L
Xenopus laevis
XB-GENE-17335312
I
hoxa13.S
Xenopus laevis
XB-GENE-865329
I
hoxa13a
Danio rerio
ENSDARG00000100312
I
hoxa13a
Gasterosteus aculeatus
ENSGACG00000007134
I
hoxa13a
Oryzias latipes
ENSORLG00000005043
I
hoxa13a
Tetraodon nigroviridis
ENSTNIG00000009207
I
hoxa13a
Takifugu rubripes
ENSTRUG00000016010
I
hoxa13b
Danio rerio
ENSDARG00000036254
I
hoxa13b
Gasterosteus aculeatus
ENSGACG00000008296
I
hoxa13b
Oryzias latipes
ENSORLG00000007597
I
hoxa13b
Tetraodon nigroviridis
ENSTNIG00000001781
I
hoxa13b
Takifugu rubripes
ENSTRUG00000015364
I
HOXB13
Bos taurus
ENSBTAG00000014663
I
HOXB13
Canis familiaris
ENSCAFG00000016870
I
HOXB13
Callithrix jacchus
ENSCJAG00000007437
I
HOXB13
Cavia porcellus
ENSCPOG00000013509
I
HOXB13
Dasypus novemcinctus
ENSDNOG00000015177
I
Hoxb13
Dipodomys ordii
ENSDORG00000008369
I
HOXB13
Equus caballus
ENSECAG00000013619
I
HOXB13
Erinaceus europaeus
ENSEEUG00000004337
I
HOXB13
Homo sapiens
ENSG00000159184
D
HOXB13
Gorilla gorilla
ENSGGOG00000001945
I
HOXB13
Loxodonta africana
ENSLAFG00000011262
I
HOXB13
Microcebus murinus
ENSMICG00000007546
I
HOXB13
Monodelphis domestica
ENSMODG00000012310
I
Hoxb13
Mus musculus
ENSMUSG00000049604
D
HOXB13
Oryctolagus cuniculus
ENSOCUG00000012816
I
HOXB13
Otolemur garnettii
ENSOGAG00000032643
I
HOXB13
Ochotona princeps
ENSOPRG00000010125
I
HOXB13
Procavia capensis
ENSPCAG00000012722
I
HOXB13
Pan troglodytes
ENSPTRG00000009360
I
HOXB13
Pteropus vampyrus
ENSPVAG00000015531
I
Hoxb13
Rattus norvegicus
ENSRNOG00000007491
I
HOXB13
Sus scrofa
ENSSSCG00000017541
I
HOXB13
Tupaia belangeri
ENSTBEG00000002229
I
HOXB13
Tursiops truncatus
ENSTTRG00000007314
I
hoxb13a
Danio rerio
ENSDARG00000056015
I
hoxb13a
Gasterosteus aculeatus
ENSGACG00000003421
I
hoxb13a
Gasterosteus aculeatus
ENSGACG00000005617
I
hoxb13a
Oryzias latipes
ENSORLG00000017031
I
hoxb13a
Tetraodon nigroviridis
ENSTNIG00000000761
I
hoxb13a
Takifugu rubripes
ENSTRUG00000005751
I
hoxb13a
Takifugu rubripes
ENSTRUG00000009416
I
HOXC13
Anolis carolinensis
ENSACAG00000010829
I
HOXC13
Bos taurus
ENSBTAG00000000923
I
HOXC13
Canis familiaris
ENSCAFG00000006648
I
HOXC13
Callithrix jacchus
ENSCJAG00000018800
I
HOXC13
Cavia porcellus
ENSCPOG00000020390
I
HOXC13
Equus caballus
ENSECAG00000024867
I
HOXC13
Homo sapiens
ENSG00000123364
D
HOXC13
Gorilla gorilla
ENSGGOG00000015765
I
HOXC13
Loxodonta africana
ENSLAFG00000030195
I
HOXC13
Myotis lucifugus
ENSMLUG00000015050
I
Hoxc13
Mus musculus
ENSMUSG00000001655
D
HOXC13
Oryctolagus cuniculus
ENSOCUG00000001156
I
HOXC13
Otolemur garnettii
ENSOGAG00000030391
I
HOXC13
Ochotona princeps
ENSOPRG00000006077
I
HOXC13
Pan troglodytes
ENSPTRG00000005025
I
HOXC13
Pteropus vampyrus
ENSPVAG00000012296
I
Hoxc13
Rattus norvegicus
ENSRNOG00000028679
I
HOXC13
Sorex araneus
ENSSARG00000005621
I
HOXC13
Sus scrofa
ENSSSCG00000000279
I
HOXC13
Tupaia belangeri
ENSTBEG00000016269
I
HOXC13
Tursiops truncatus
ENSTTRG00000004546
I
hoxc13
Xenopus tropicalis
XB-GENE-478832
I
hoxc13a
Danio rerio
ENSDARG00000070353
I
hoxc13a
Gasterosteus aculeatus
ENSGACG00000009389
I
hoxc13a
Oryzias latipes
ENSORLG00000007896
I
hoxc13a
Tetraodon nigroviridis
ENSTNIG00000001774
I
hoxc13a
Takifugu rubripes
ENSTRUG00000004383
I
hoxc13b
Danio rerio
ENSDARG00000090023
I
HOXD13
Bos taurus
ENSBTAG00000004313
I
HOXD13
Callithrix jacchus
ENSCJAG00000008250
I
HOXD13
Cavia porcellus
ENSCPOG00000006722
I
HOXD13
Dasypus novemcinctus
ENSDNOG00000019799
I
HOXD13
Homo sapiens
ENSG00000128714
D
HOXD13
Loxodonta africana
ENSLAFG00000027629
I
HOXD13
Microcebus murinus
ENSMICG00000002170
I
HOXD13
Myotis lucifugus
ENSMLUG00000006997
I
HOXD13
Monodelphis domestica
ENSMODG00000009550
I
Hoxd13
Mus musculus
ENSMUSG00000001819
D
HOXD13
Otolemur garnettii
ENSOGAG00000027055
I
HOXD13
Pan troglodytes
ENSPTRG00000012664
I
HOXD13
Pteropus vampyrus
ENSPVAG00000017415
I
Hoxd13
Rattus norvegicus
ENSRNOG00000001588
I
HOXD13
Sus scrofa
ENSSSCG00000015979
I
HOXD13
Tursiops truncatus
ENSTTRG00000013771
I
HOXD13
Vicugna pacos
ENSVPAG00000010195
I
hoxd13
Xenopus tropicalis
XB-GENE-482320
I
hoxd13.S
Xenopus laevis
XB-GENE-482324
I
hoxd13a
Danio rerio
ENSDARG00000059256
D
ML021120a
Mnemiopsis leidyi
ML021120a
I
Myotis_brandtii_HOXB13_10017024
Myotis brandtii
Myotis_brandtii_HOXB13_10017024
I
Myotis_brandtii_HOXC13_10022976
Myotis brandtii
Myotis_brandtii_HOXC13_10022976
I
Myotis_brandtii_HOXD13_10034995
Myotis brandtii
Myotis_brandtii_HOXD13_10034995
I
Ogr02757
Ophisaurus gracilis
Ogr02757
I
Ogr12572
Ophisaurus gracilis
Ogr12572
I
Ogr14606
Ophisaurus gracilis
Ogr14606
I
Pvit_02704
Pogona vitticeps
Pvit_02704
I
Pvit_07423
Pogona vitticeps
Pvit_07423
I
SEBOX
Cavia porcellus
ENSCPOG00000005498
I
SEBOX
Pteropus vampyrus
ENSPVAG00000002882
I
Tal_R009649
Tyto alba
Tal_R009649
I
Tal_R009960
Tyto alba
Tal_R009960
I
Tal_R011386
Tyto alba
Tal_R011386
I
TELCIR_13423
Teladorsagia circumcincta
TELCIR_13423
I