CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

POPTR_0005s05700 *(Populus trichocarpa)* WRKY
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03106 (WRKY)	IPR003657	POPTR_0005s05700	T354359_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
WRKY15 M02549_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Weirauch et al.(2014) pTH7602	0.883	0.881
WRKY15 M07383_2.00	Arabidopsis thaliana	AAAAGTCAACKN	NMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY15_colamp_a	0.883	0.881
WRKY15 M07384_2.00	Arabidopsis thaliana	NWAAGTCAACB	VGTTGACTTWN	Dap-seq OMalley et al.(2016) WRKY15_col_b	0.883	0.881
WRKY21 M02553_2.00	Arabidopsis thaliana	NNRGTCAAMN	NKTTGACYNN	PBM Weirauch et al.(2014) pTH7422	0.882	0.864
WRKY21 M07389_2.00	Arabidopsis thaliana	HAAAGTCAACNNH	DNNGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_colamp_a	0.882	0.864
WRKY21 M07390_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_col	0.882	0.864
Q40828_PETCR M11467_2.00	Petroselinum crispum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY_Q2	0.876	0.847
WRKY7 M07412_2.00	Arabidopsis thaliana	NNDDDNNNNMAAAGTCAACGV	BCGTTGACTTTKNNNNHHHNN	Dap-seq OMalley et al.(2016) WRKY7_colamp_a	0.873	0.847
WRKY7 M07413_2.00	Arabidopsis thaliana	NAAAAGTCAACKNN	NNMGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY7_col	0.873	0.847
WRKY11 M02559_2.00	Arabidopsis thaliana	NDGTCAAHNN	NNDTTGACHN	PBM Weirauch et al.(2014) pTH8091	0.873	0.847
WRKY11 M07415_2.00	Arabidopsis thaliana	NHAAAGTCAACBNH	DNVGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY11_col_a	0.873	0.847
WRKY11 M11464_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY11_Q2	0.873	0.847
WRKY17 M02550_2.00	Arabidopsis thaliana	NNDGTCAAHN	NDTTGACHNN	PBM Weirauch et al.(2014) pTH8088	0.867	0.831
WRKY17 M07385_2.00	Arabidopsis thaliana	NHAAAGTCAACRNN	NNYGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY17_col_a	0.867	0.831
WRKY17 M07386_2.00	Arabidopsis thaliana	NMAAAGTCAACGN	NCGTTGACTTTKN	Dap-seq OMalley et al.(2016) WRKY17_colamp_a	0.867	0.831
WRKY65 M07372_2.00	Arabidopsis thaliana	NWWAGTCAACG	CGTTGACTWWN	Dap-seq OMalley et al.(2016) WRKY65_col_a	0.851	0.644
WRKY65 M07373_2.00	Arabidopsis thaliana	NAAAGTCAACGN	NCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY65_colamp_a	0.851	0.644
WRKY14 M00731_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Chang et al.(2013) pTH7570	0.848	0.644
WRKY14 M07375_2.00	Arabidopsis thaliana	NAAAGTCAACGNN	NNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_col_a	0.848	0.644
WRKY14 M07376_2.00	Arabidopsis thaliana	NAAAGTCAACGNH	DNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_colamp_a	0.848	0.644
WRKY27 M02566_2.00	Arabidopsis thaliana	NNGTCHDNN	NNHDGACNN	PBM Weirauch et al.(2014) pTH8188	0.847	0.627
WRKY27 M07430_2.00	Arabidopsis thaliana	MAAAGTCAACKNH	DNMGTTGACTTTK	Dap-seq OMalley et al.(2016) WRKY27_col_a	0.847	0.627
WRKY27 M07431_2.00	Arabidopsis thaliana	HAAAGTCAACKNH	DNMGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY27_colamp_a	0.847	0.627
WRKY22 M02557_2.00	Arabidopsis thaliana	NNNKTMHDNN	NNHDKAMNNN	PBM Weirauch et al.(2014) pTH7320	0.845	0.644
WRKY22 M07400_2.00	Arabidopsis thaliana	AAAAGTCAACKNH	DNMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY22_colamp_a	0.845	0.644
WRKY22 M07401_2.00	Arabidopsis thaliana	NAAAGTCAACKNH	DNMGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY22_col	0.845	0.644
WRKY29 M02558_2.00	Arabidopsis thaliana	NNNGTCHDNN	NNHDGACNNN	PBM Weirauch et al.(2014) pTH9604	0.840	0.593
WRKY29 M07410_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY29_col_a	0.840	0.593
WRKY29 M07411_2.00	Arabidopsis thaliana	HWWAGTCAAMDNN	NNHKTTGACTWWD	Dap-seq OMalley et al.(2016) WRKY29_colamp_a	0.840	0.593
fgenesh1_pg.C_Chr_11.0001000193 M02570_2.00	Ostreococcus tauri	NRGTCARNN	NNYTGACYN	PBM Weirauch et al.(2014) pTH9432	0.819	0.576
WRKY48 M02565_2.00	Arabidopsis thaliana	NNVGTCADNN	NNHTGACBNN	PBM Weirauch et al.(2014) pTH7552	0.819	0.525
ZAP1 M00982_2.00	Arabidopsis thaliana	NRGTCAAN	NTTGACYN	PBM Lindemose et al.(2014) WRKY1	0.818	0.610
WRKY71 M07374_2.00	Arabidopsis thaliana	HAAAGTCAAMN	NKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY71_col_a	0.816	0.542
WRKY28 M07406_2.00	Arabidopsis thaliana	HAAAGTCAAMNNH	DNNKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY28_col_a	0.815	0.525
WRKY28 M07407_2.00	Arabidopsis thaliana	VAAAGTCAAMG	CKTTGACTTTB	Dap-seq OMalley et al.(2016) WRKY28_colamp_a	0.815	0.525
WRKY8 M02564_2.00	Arabidopsis thaliana	NRGTCAAHN	NDTTGACYN	PBM Weirauch et al.(2014) pTH7554	0.815	0.508
WRKY8 M07428_2.00	Arabidopsis thaliana	NAAAAGTCAACRNHW	WDNYGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY8_colamp_a	0.815	0.508
WRKY8 M07429_2.00	Arabidopsis thaliana	NNVAAAGTCAACRNH	DNYGTTGACTTTBNN	Dap-seq OMalley et al.(2016) WRKY8_col	0.815	0.508
WRKY57 M02547_2.00	Arabidopsis thaliana	NNRGTCAAHN	NDTTGACYNN	PBM Weirauch et al.(2014) pTH7917	0.815	0.525
WRKY23 M02556_2.00	Arabidopsis thaliana	RGTCAACG	CGTTGACY	PBM Weirauch et al.(2014) pTH7387	0.813	0.508
WRKY23 M01089_2.00	Arabidopsis thaliana	NRGTCAAM	KTTGACYN	PBM Sullivan et al.(2014) pTH7671	0.813	0.508
WRKY50 M07424_2.00	Arabidopsis thaliana	NNAAAAGTCAAMN	NKTTGACTTTTNN	Dap-seq OMalley et al.(2016) WRKY50_col_a	0.813	0.610
WRKY50 M07425_2.00	Arabidopsis thaliana	NWAAGTCAANN	NNTTGACTTWN	Dap-seq OMalley et al.(2016) WRKY50_colamp_a	0.813	0.610
For this family, TFs with SR scores > 0.808* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
POPTR_0005s05700.1	WRKY	285	343	PDEYSWRKYGQKPIKGSPHPRGYYKCSSLRGCPARKHVERCLEEPSMLIVTYEGDHNHS

Links
Other WRKY family TFs
Other *Populus trichocarpa* TFs

1667 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ENSAMEG00000014907	Ailuropoda melanoleuca	ENSAMEG00000014907	I
ENSMEUG00000007286	Macropus eugenii	ENSMEUG00000007286	I
ENSPFOG00000024243	Poecilia formosa	ENSPFOG00000024243	I
ENSPPYG00000008231	Pongo abelii	ENSPPYG00000008231	I
ENSSTOG00000020272	Ictidomys tridecemlineatus	ENSSTOG00000020272	I
ENSTGUG00000015457	Taeniopygia guttata	ENSTGUG00000015457	I
ENSTNIG00000003241	Tetraodon nigroviridis	ENSTNIG00000003241	N
ENSTNIG00000016643	Tetraodon nigroviridis	ENSTNIG00000016643	N
ENSTNIG00000018632	Tetraodon nigroviridis	ENSTNIG00000018632	N
ENSTNIG00000019151	Tetraodon nigroviridis	ENSTNIG00000019151	N
ENSTNIG00000019152	Tetraodon nigroviridis	ENSTNIG00000019152	I
ENSTNIG00000019520	Tetraodon nigroviridis	ENSTNIG00000019520	N
ENSTRUG00000000603	Takifugu rubripes	ENSTRUG00000000603	N
ENSTRUG00000003261	Takifugu rubripes	ENSTRUG00000003261	N
ENSTRUG00000004613	Takifugu rubripes	ENSTRUG00000004613	I
ENSTRUG00000008763	Takifugu rubripes	ENSTRUG00000008763	I
ENSTRUG00000009083	Takifugu rubripes	ENSTRUG00000009083	N
ENSTRUG00000010837	Takifugu rubripes	ENSTRUG00000010837	I
ENSTRUG00000012122	Takifugu rubripes	ENSTRUG00000012122	I
ENSTRUG00000012926	Takifugu rubripes	ENSTRUG00000012926	N
ENSTRUG00000015486	Takifugu rubripes	ENSTRUG00000015486	I
e_gw.355.83.1	Branchiostoma floridae	e_gw.355.83.1	N
e_gw.355.85.1	Branchiostoma floridae	e_gw.355.85.1	N
HETIRDRAFT_244333	Heterobasidion irregulare	HETIRDRAFT_244333	N
HSF5	Dasypus novemcinctus	ENSDNOG00000014871	I
HSF5	Bos taurus	ENSBTAG00000001166	I
HSF5	Canis familiaris	ENSCAFG00000017528	I
HSF5	Cavia porcellus	ENSCPOG00000003431	I
hsf5	Danio rerio	ENSDARG00000104686	I
HSF5	Sus scrofa	ENSSSCG00000017641	I
HSF5	Homo sapiens	ENSG00000176160	D
HSF5	Gorilla gorilla	ENSGGOG00000013788	I
HSF5	Loxodonta africana	ENSLAFG00000029785	I
Hsf5	Mus musculus	ENSMUSG00000070345	I
HSF5	Procavia capensis	ENSPCAG00000011323	I
HSF5	Pan troglodytes	ENSPTRG00000009453	I
HSF5	Pteropus vampyrus	ENSPVAG00000002322	I
M413DRAFT_74768	Hebeloma cylindrosporum	M413DRAFT_74768	N
PLEOSDRAFT_1046174	Pleurotus ostreatus	PLEOSDRAFT_1046174	I
WALSEDRAFT_18221	Wallemia sebi	WALSEDRAFT_18221	N

POPTR_0005s05700 (Populus trichocarpa) WRKY

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1667 Related TFs

POPTR_0005s05700 **(Populus trichocarpa)
WRKY**