CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm019286
(
Prunus mume
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
Pm019286
T355373_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY70
M07399_2.00
Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY70_col
0.847
0.678
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm019286
WRKY
131
191
EDGRAWRKYGQKEILNAPYPRAYFRCTRKYDQGCRATKQVQQVQDNPRLYQTTYIGQHTCK
Links
Other
WRKY
family TFs
Other
Prunus mume
TFs
273 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CaO19.2272
Candida albicans
CaO19.2272
N
CaO19.9812
Candida albicans
CaO19.9812
N
CPAG_05224
Candida parapsilosis
CPAG_05224
N
CTRG_01740
Candida tropicalis
CTRG_01740
N
G210_2304
Candida maltosa
G210_2304
N