Carubv10006884m.g (Capsella rubella)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Carubv10006884m.g T355953_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY53
M01090_2.00 		Arabidopsis thaliana
RGTCAACNN
NNGTTGACY		 PBM
Sullivan et al.(2014)
pTH8245 		0.887 0.983
WRKY30
M02563_2.00 		Arabidopsis thaliana
RGTCAACNNN
NNNGTTGACY		 PBM
Weirauch et al.(2014)
pTH7611 		0.850 0.712
WRKY30
M07422_2.00 		Arabidopsis thaliana
DAAGTCAACGN
NCGTTGACTTH		 Dap-seq
OMalley et al.(2016)
WRKY30_col_a 		0.850 0.712
WRKY30
M07423_2.00 		Arabidopsis thaliana
NNAAGTCAACGNH
DNCGTTGACTTNN		 Dap-seq
OMalley et al.(2016)
WRKY30_colamp_a 		0.850 0.712
WRKY55
M07392_2.00 		Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD		 Dap-seq
OMalley et al.(2016)
WRKY55_col_a 		0.829 0.678
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.820 0.610
WRKY46
M07395_2.00 		Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB		 Dap-seq
OMalley et al.(2016)
WRKY46_col_a 		0.817 0.644
WRKY46
M07396_2.00 		Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD		 Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a 		0.817 0.644
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10006884m WRKY 154 214

Links

Other WRKY family TFs
Other Capsella rubella TFs

520 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R003433 Calypte anna Aan_R003433 I
ACEP11559 Atta cephalotes ACEP11559 I
ACYPI008795 Acyrthosiphon pisum ACYPI008795 I
Alligator_sinensis_CCG000584.1 Alligator sinensis Alligator_sinensis_CCG000584.1 I
Alligator_sinensis_CCG002179.1 Alligator sinensis Alligator_sinensis_CCG002179.1 I
Alligator_sinensis_CCG018819.2 Alligator sinensis Alligator_sinensis_CCG018819.2 I
ANCCAN_07437 Ancylostoma caninum ANCCAN_07437 I
ANCCEY_02986 Ancylostoma ceylanicum ANCCEY_02986 I
ASIM_0001112601 Anisakis simplex ASIM_0001112601 I
BGLB010876 Biomphalaria glabrata BGLB010876 I
CBG25154 Caenorhabditis briggsae CBG25154 I
Cflo_06562--XP_001122224.1_APIME Camponotus floridanus Cflo_06562--XP_001122224.1_APIME I
CLEC000271 Cimex lectularius CLEC000271 I
Cmyd_10015204 Chelonia mydas Cmyd_10015204 I
Cmyd_10021098 Chelonia mydas Cmyd_10021098 I
CRE29626 Caenorhabditis remanei CRE29626 I
DAPPUDRAFT_231203 Daphnia pulex DAPPUDRAFT_231203 I
ENSAMEG00000010346 Ailuropoda melanoleuca ENSAMEG00000010346 I
ENSAMXG00000000734 Astyanax mexicanus ENSAMXG00000000734 I
ENSAMXG00000003234 Astyanax mexicanus ENSAMXG00000003234 I
ENSAMXG00000013869 Astyanax mexicanus ENSAMXG00000013869 I
ENSAMXG00000024937 Astyanax mexicanus ENSAMXG00000024937 I
ENSAPLG00000001132 Anas platyrhynchos ENSAPLG00000001132 I
ENSAPLG00000006596 Anas platyrhynchos ENSAPLG00000006596 I
ENSBTAP00000053555-D1 Bos grunniens ENSBTAP00000053555-D1 I
ENSCAFG00000024903 Canis familiaris ENSCAFG00000024903 I
ENSCPOG00000024116 Cavia porcellus ENSCPOG00000024116 I
ENSCPOG00000027481 Cavia porcellus ENSCPOG00000027481 I
ENSCSAG00000018634 Chlorocebus sabaeus ENSCSAG00000018634 I
ENSCSAG00000018753 Chlorocebus sabaeus ENSCSAG00000018753 I
ENSECAG00000018532 Equus caballus ENSECAG00000018532 I
ENSFALG00000005612 Ficedula albicollis ENSFALG00000005612 I
ENSFALG00000006844 Ficedula albicollis ENSFALG00000006844 I
ENSFALG00000015256 Ficedula albicollis ENSFALG00000015256 I
ENSGMOG00000001345 Gadus morhua ENSGMOG00000001345 I
ENSGMOG00000012206 Gadus morhua ENSGMOG00000012206 I
ENSGMOG00000016689 Gadus morhua ENSGMOG00000016689 I
ENSGMOG00000017938 Gadus morhua ENSGMOG00000017938 I
ENSGMOG00000018976 Gadus morhua ENSGMOG00000018976 I
ENSLACG00000006698 Latimeria chalumnae ENSLACG00000006698 I
ENSLACG00000009361 Latimeria chalumnae ENSLACG00000009361 I
ENSLACG00000017985 Latimeria chalumnae ENSLACG00000017985 I
ENSLOCG00000000440 Lepisosteus oculatus ENSLOCG00000000440 I
ENSLOCG00000004673 Lepisosteus oculatus ENSLOCG00000004673 I
ENSLOCG00000018124 Lepisosteus oculatus ENSLOCG00000018124 I
ENSMEUG00000004266 Macropus eugenii ENSMEUG00000004266 I
ENSMICG00000017086 Microcebus murinus ENSMICG00000017086 I
ENSMPUG00000009792 Mustela putorius furo ENSMPUG00000009792 I
ENSMPUG00000017703 Mustela putorius furo ENSMPUG00000017703 I
ENSNLEG00000006460 Nomascus leucogenys ENSNLEG00000006460 I
ENSNLEG00000010420 Nomascus leucogenys ENSNLEG00000010420 I
ENSOARG00000001355 Ovis aries ENSOARG00000001355 I
ENSOARG00000008034 Ovis aries ENSOARG00000008034 I
ENSOGAG00000031340 Otolemur garnettii ENSOGAG00000031340 I
ENSONIG00000005596 Oreochromis niloticus ENSONIG00000005596 I
ENSONIG00000014852 Oreochromis niloticus ENSONIG00000014852 I
ENSONIG00000020811 Oreochromis niloticus ENSONIG00000020811 I
ENSONIG00000021147 Oreochromis niloticus ENSONIG00000021147 I
ENSONIG00000021195 Oreochromis niloticus ENSONIG00000021195 I
ENSP00000380167 Macaca fascicularis ENSP00000380167 I
ENSPANG00000005175 Papio anubis ENSPANG00000005175 I
ENSPANG00000007923 Papio anubis ENSPANG00000007923 I
ENSPANG00000016615 Papio anubis ENSPANG00000016615 I
ENSPFOG00000007436 Poecilia formosa ENSPFOG00000007436 I
ENSPFOG00000017458 Poecilia formosa ENSPFOG00000017458 I
ENSPFOG00000017599 Poecilia formosa ENSPFOG00000017599 I
ENSPFOG00000020839 Poecilia formosa ENSPFOG00000020839 I
ENSPFOG00000023481 Poecilia formosa ENSPFOG00000023481 I
ENSPPYG00000011008 Pongo abelii ENSPPYG00000011008 I
ENSPSIG00000000736 Pelodiscus sinensis ENSPSIG00000000736 I
ENSPSIG00000000813 Pelodiscus sinensis ENSPSIG00000000813 I
ENSSHAG00000013493 Sarcophilus harrisii ENSSHAG00000013493 I
ENSSHAG00000018460 Sarcophilus harrisii ENSSHAG00000018460 I
ENSSSCG00000030898 Sus scrofa ENSSSCG00000030898 I
ENSSTOG00000026889 Ictidomys tridecemlineatus ENSSTOG00000026889 I
ENSSTOG00000029174 Ictidomys tridecemlineatus ENSSTOG00000029174 I
ENSTGUG00000004675 Taeniopygia guttata ENSTGUG00000004675 I
ENSTRUG00000018288 Takifugu rubripes ENSTRUG00000018288 I
ENSXMAG00000003150 Xiphophorus maculatus ENSXMAG00000003150 I
ENSXMAG00000004753 Xiphophorus maculatus ENSXMAG00000004753 I
ENSXMAG00000019811 Xiphophorus maculatus ENSXMAG00000019811 I
ENSXMAG00000019914 Xiphophorus maculatus ENSXMAG00000019914 I
ENSXMAG00000020173 Xiphophorus maculatus ENSXMAG00000020173 I
estExt_GenewiseH_1.C_3410022 Branchiostoma floridae estExt_GenewiseH_1.C_3410022 I
EVEC_0000854501 Enterobius vermicularis EVEC_0000854501 I
GB54168 Apis mellifera GB54168 I
GD11529 Drosophila simulans FBgn0183270 I
Gfo_R016068 Geospiza fortis Gfo_R016068 I
HCOI00814500 Haemonchus contortus HCOI00814500 I
HHAL006059-PA Halyomorpha halys HHAL006059-PA I
HPLM_0000399501 Haemonchus placei HPLM_0000399501 I
KGM_10225 Danaus plexippus KGM_10225 I
L596_g19748 Steinernema carpocapsae L596_g19748 I
L889_g19010 Steinernema feltiae L889_g19010 I
L892_g30919 Steinernema scapterisci L892_g30919 I
L898_g8988 Steinernema monticolum L898_g8988 I
LDEC009782 Leptinotarsa decemlineata LDEC009782 I
MAF Anolis carolinensis ENSACAG00000022476 I
MAF Bos taurus ENSBTAG00000044192 I
MAF Callithrix jacchus ENSCJAG00000018981 I
MAF Dasypus novemcinctus ENSDNOG00000037123 I
MAF Erinaceus europaeus ENSEEUG00000004490 I
MAF Homo sapiens ENSG00000178573 D
MAF Gasterosteus aculeatus ENSGACG00000012230 I
MAF Gallus gallus ENSGALG00000026258 I
MAF Gorilla gorilla ENSGGOG00000011454 I
MAF Loxodonta africana ENSLAFG00000003211 I
MAF Monodelphis domestica ENSMODG00000008141 I
Maf Mus musculus ENSMUSG00000055435 D
MAF Ochotona princeps ENSOPRG00000016293 I
MAF Oryzias latipes ENSORLG00000010298 I
MAF Pan troglodytes ENSPTRG00000008378 I
Maf Rattus norvegicus ENSRNOG00000012428 I
MAF Tetraodon nigroviridis ENSTNIG00000017941 I
MAF Takifugu rubripes ENSTRUG00000011245 I
MAF Takifugu rubripes ENSTRUG00000018285 I
maf Xenopus tropicalis XB-GENE-6053271 I
maf-1 Caenorhabditis elegans WBGene00077521 I
MAFA Bos taurus ENSBTAG00000026344 I
MAFA Canis familiaris ENSCAFG00000032457 I
MAFA Cavia porcellus ENSCPOG00000021977 I
mafa Danio rerio ENSDARG00000015890 I
MAFA Homo sapiens ENSG00000182759 D
mafa Gasterosteus aculeatus ENSGACG00000015980 I
MAFA Gallus gallus ENSGALG00000026264 I
MAFA Gorilla gorilla ENSGGOG00000002831 I
MAFA Meleagris gallopavo ENSMGAG00000013012 I
Mafa Mus musculus ENSMUSG00000047591 D
MAFA Otolemur garnettii ENSOGAG00000013431 I
Mafa Rattus norvegicus ENSRNOG00000007668 I
MAFA Taeniopygia guttata ENSTGUG00000012742 I
mafa Xenopus tropicalis XB-GENE-6086265 I
mafaa Gasterosteus aculeatus ENSGACG00000005347 I
mafaa Takifugu rubripes ENSTRUG00000001279 I
MAFB Bos taurus ENSBTAG00000003396 I
mafb Danio rerio ENSDARG00000076520 I
MAFB Dasypus novemcinctus ENSDNOG00000009008 I
MAFB Felis catus ENSFCAG00000010841 I
MAFB Homo sapiens ENSG00000204103 D
MAFB Gorilla gorilla ENSGGOG00000001226 I
MAFB Loxodonta africana ENSLAFG00000006958 I
MAFB Meleagris gallopavo ENSMGAG00000003300 I
MAFB Myotis lucifugus ENSMLUG00000003028 I
MAFB Macaca mulatta ENSMMUG00000004148 I
MAFB Monodelphis domestica ENSMODG00000000534 I
Mafb Mus musculus ENSMUSG00000074622 D
MAFB Otolemur garnettii ENSOGAG00000030499 I
mafb Oryzias latipes ENSORLG00000009643 I
MAFB Pan troglodytes ENSPTRG00000030557 I
Mafb Rattus norvegicus ENSRNOG00000016037 I
MAFB Tursiops truncatus ENSTTRG00000011775 I
mafb Xenopus tropicalis XB-GENE-6085859 I
mafb.S Xenopus laevis XB-GENE-6085884 I
mafba Danio rerio ENSDARG00000017121 I
mafba Oryzias latipes ENSORLG00000009479 I
mafba Tetraodon nigroviridis ENSTNIG00000017865 I
mafbb Danio rerio ENSDARG00000070542 I
mafbb Gasterosteus aculeatus ENSGACG00000010185 I
mafbb Oryzias latipes ENSORLG00000013930 I
mafbb Tetraodon nigroviridis ENSTNIG00000007316 I
mafbb Takifugu rubripes ENSTRUG00000012552 I
maff Gasterosteus aculeatus ENSGACG00000004545 I
MAF_AVIS4 Avian musculoaponeurotic fibrosarco MAF_AVIS4 D
MAF_CHICK Gallus gallus MAF_CHICK D
Minc00226 Meloidogyne incognita Minc00226 I
Myotis_brandtii_MAFA_10006409 Myotis brandtii Myotis_brandtii_MAFA_10006409 I
Myotis_brandtii_MAFA_10035404 Myotis brandtii Myotis_brandtii_MAFA_10035404 I
Myotis_brandtii_Mafb_10025215 Myotis brandtii Myotis_brandtii_Mafb_10025215 I
NV13877 Nasonia vitripennis NV13877 I
Ocbimv22039773m.g Octopus bimaculoides Ocbimv22039773m.g I
OESDEN_08775 Oesophagostomum dentatum OESDEN_08775 I
OESDEN_13828 Oesophagostomum dentatum OESDEN_13828 I
Ogr01273 Ophisaurus gracilis Ogr01273 I
Ogr02061 Ophisaurus gracilis Ogr02061 I
Ogr06803 Ophisaurus gracilis Ogr06803 I
PTRK_0001324900 Parastrongyloides trichosuri PTRK_0001324900 N
Pvit_08731 Pogona vitticeps Pvit_08731 I
Pvit_15784 Pogona vitticeps Pvit_15784 I
RPRC013311 Rhodnius prolixus RPRC013311 I
SMUV_0000634801 Syphacia muris SMUV_0000634801 I
SPAL_0000715500 Strongyloides papillosus SPAL_0000715500 I
SSTP_0000029700 Strongyloides stercoralis SSTP_0000029700 I
SVE_0161000 Strongyloides venezuelensis SVE_0161000 I
SVUK_0001190001 Strongylus vulgaris SVUK_0001190001 I
TCNE_0000802301 Toxocara canis TCNE_0000802301 I
TELCIR_07015 Teladorsagia circumcincta TELCIR_07015 I