Pavir.Ca01708 (Panicum virgatum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Pavir.Ca01708 T356705_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY55
M07392_2.00 		Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD		 Dap-seq
OMalley et al.(2016)
WRKY55_col_a 		0.847 0.712
WRKY53
M01090_2.00 		Arabidopsis thaliana
RGTCAACNN
NNGTTGACY		 PBM
Sullivan et al.(2014)
pTH8245 		0.833 0.644
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.822 0.576
WRKY30
M02563_2.00 		Arabidopsis thaliana
RGTCAACNNN
NNNGTTGACY		 PBM
Weirauch et al.(2014)
pTH7611 		0.817 0.593
WRKY30
M07422_2.00 		Arabidopsis thaliana
DAAGTCAACGN
NCGTTGACTTH		 Dap-seq
OMalley et al.(2016)
WRKY30_col_a 		0.817 0.593
WRKY30
M07423_2.00 		Arabidopsis thaliana
NNAAGTCAACGNH
DNCGTTGACTTNN		 Dap-seq
OMalley et al.(2016)
WRKY30_colamp_a 		0.817 0.593
WRKY46
M07395_2.00 		Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB		 Dap-seq
OMalley et al.(2016)
WRKY46_col_a 		0.813 0.627
WRKY46
M07396_2.00 		Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD		 Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a 		0.813 0.627
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca01708.1.p WRKY 221 281

Links

Other WRKY family TFs
Other Panicum virgatum TFs

493 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL003875 Aedes aegypti AAEL003875 I
AAEL012404 Aedes aegypti AAEL012404 I
Aan_R004593 Calypte anna Aan_R004593 I
AARA010384 Anopheles arabiensis AARA010384 I
AATE004178 Anopheles atroparvus AATE004178 I
ACEP25215 Atta cephalotes ACEP25215 I
ACUA022925 Anopheles culicifacies ACUA022925 I
ACYPI008529 Acyrthosiphon pisum ACYPI008529 I
AEPI000655 Anopheles epiroticus AEPI000655 I
AFAF010157 Anopheles farauti AFAF010157 I
Afo_R006896 Aptenodytes forsteri Afo_R006896 I
AFUN011444 Anopheles funestus AFUN011444 I
AGAP000673 Anopheles gambiae AGAP000673 I
Alligator_sinensis_CCG008293.1 Alligator sinensis Alligator_sinensis_CCG008293.1 I
Alligator_sinensis_CCG014455.1 Alligator sinensis Alligator_sinensis_CCG014455.1 I
AMEC017534 Anopheles melas AMEC017534 I
AMEM002678 Anopheles merus AMEM002678 I
AMIN002038 Anopheles minimus AMIN002038 I
ASIS011603 Anopheles sinensis ASIS011603 I
ASTEI01151 Anopheles stephensi ASTEI01151 I
A_02037 Schistosoma haematobium A_02037 I
BGIBMGA006942 Bombyx mori BGIBMGA006942 I
BGIBMGA006943 Bombyx mori BGIBMGA006943 I
BGLB011938 Biomphalaria glabrata BGLB011938 I
CapteG178994 Capitella teleta CapteG178994 I
CapteG224157 Capitella teleta CapteG224157 I
CapteG39149 Capitella teleta CapteG39149 I
CapteG39158 Capitella teleta CapteG39158 I
CGI_10004780 Crassostrea gigas CGI_10004780 I
CGI_10004781 Crassostrea gigas CGI_10004781 I
CGI_10007690 Crassostrea gigas CGI_10007690 I
CLEC009335 Cimex lectularius CLEC009335 I
Cmyd_10010806 Chelonia mydas Cmyd_10010806 I
Cmyd_10015831 Chelonia mydas Cmyd_10015831 I
CPIJ003609 Culex quinquefasciatus CPIJ003609 I
CpipJ_CPIJ003609 Culex pipiens CpipJ_CPIJ003609 I
csin109639 Clonorchis sinensis csin109639 I
D915_04632 Fasciola hepatica D915_04632 I
D917_06327 Trichinella nativa D917_06327 I
D917_07971 Trichinella nativa D917_07971 I
D918_01017 Trichuris suis D918_01017 I
DAPPUDRAFT_106303 Daphnia pulex DAPPUDRAFT_106303 I
ECANG7_05597 Echinococcus canadensis ECANG7_05597 I
ECPE_0000838601 Echinostoma caproni ECPE_0000838601 I
EFV52612 Trichinella spiralis EFV52612 I
EFV52785 Trichinella spiralis EFV52785 I
EmuJ_000748800 Echinococcus multilocularis EmuJ_000748800 I
ENSAMEG00000010417 Ailuropoda melanoleuca ENSAMEG00000010417 I
ENSAMEG00000019912 Ailuropoda melanoleuca ENSAMEG00000019912 I
ENSAMXG00000004709 Astyanax mexicanus ENSAMXG00000004709 I
ENSAMXG00000011277 Astyanax mexicanus ENSAMXG00000011277 I
ENSAMXG00000013057 Astyanax mexicanus ENSAMXG00000013057 I
ENSAMXG00000015246 Astyanax mexicanus ENSAMXG00000015246 I
ENSAMXG00000020011 Astyanax mexicanus ENSAMXG00000020011 I
ENSAMXG00000025599 Astyanax mexicanus ENSAMXG00000025599 I
ENSBTAP00000002386-D1 Bos grunniens ENSBTAP00000002386-D1 I
ENSBTAP00000004166-D1 Bos grunniens ENSBTAP00000004166-D1 I
ENSCPOG00000011747 Cavia porcellus ENSCPOG00000011747 I
ENSCSAG00000013600 Chlorocebus sabaeus ENSCSAG00000013600 I
ENSCSAG00000014648 Chlorocebus sabaeus ENSCSAG00000014648 I
ENSCSAG00000015012 Chlorocebus sabaeus ENSCSAG00000015012 I
ENSCSAG00000019041 Chlorocebus sabaeus ENSCSAG00000019041 I
ENSDORG00000012608 Dipodomys ordii ENSDORG00000012608 I
ENSECAG00000002849 Equus caballus ENSECAG00000002849 I
ENSFALG00000001963 Ficedula albicollis ENSFALG00000001963 I
ENSGALG00000027511 Gallus gallus ENSGALG00000027511 I
ENSGGOG00000027746 Gorilla gorilla ENSGGOG00000027746 I
ENSGMOG00000002497 Gadus morhua ENSGMOG00000002497 I
ENSGMOG00000004590 Gadus morhua ENSGMOG00000004590 I
ENSGMOG00000008078 Gadus morhua ENSGMOG00000008078 I
ENSGMOG00000017717 Gadus morhua ENSGMOG00000017717 I
ENSGMOG00000020473 Gadus morhua ENSGMOG00000020473 N
ENSLACG00000001435 Latimeria chalumnae ENSLACG00000001435 I
ENSLACG00000005288 Latimeria chalumnae ENSLACG00000005288 I
ENSLACG00000018513 Latimeria chalumnae ENSLACG00000018513 I
ENSLOCG00000007391 Lepisosteus oculatus ENSLOCG00000007391 I
ENSLOCG00000007577 Lepisosteus oculatus ENSLOCG00000007577 I
ENSLOCG00000007856 Lepisosteus oculatus ENSLOCG00000007856 I
ENSLOCG00000011486 Lepisosteus oculatus ENSLOCG00000011486 I
ENSLOCG00000013714 Lepisosteus oculatus ENSLOCG00000013714 N
ENSMEUG00000007329 Macropus eugenii ENSMEUG00000007329 I
ENSMEUG00000012808 Macropus eugenii ENSMEUG00000012808 I
ENSMICG00000004826 Microcebus murinus ENSMICG00000004826 I
ENSMPUG00000000796 Mustela putorius furo ENSMPUG00000000796 I
ENSMPUG00000013919 Mustela putorius furo ENSMPUG00000013919 I
ENSMPUG00000020086 Mustela putorius furo ENSMPUG00000020086 I
ENSNLEG00000002050 Nomascus leucogenys ENSNLEG00000002050 I
ENSNLEG00000005184 Nomascus leucogenys ENSNLEG00000005184 I
ENSNLEG00000016729 Nomascus leucogenys ENSNLEG00000016729 I
ENSONIG00000002896 Oreochromis niloticus ENSONIG00000002896 I
ENSONIG00000003253 Oreochromis niloticus ENSONIG00000003253 N
ENSONIG00000008657 Oreochromis niloticus ENSONIG00000008657 I
ENSONIG00000008768 Oreochromis niloticus ENSONIG00000008768 I
ENSONIG00000010871 Oreochromis niloticus ENSONIG00000010871 I
ENSORLG00000018574 Oryzias latipes ENSORLG00000018574 N
ENSP00000340799 Macaca fascicularis ENSP00000340799 I
ENSP00000364430 Macaca fascicularis ENSP00000364430 I
ENSPANG00000015015 Papio anubis ENSPANG00000015015 I
ENSPANG00000016221 Papio anubis ENSPANG00000016221 I
ENSPANG00000017158 Papio anubis ENSPANG00000017158 I
ENSPANG00000023061 Papio anubis ENSPANG00000023061 I
ENSPFOG00000001566 Poecilia formosa ENSPFOG00000001566 I
ENSPFOG00000007998 Poecilia formosa ENSPFOG00000007998 I
ENSPFOG00000011175 Poecilia formosa ENSPFOG00000011175 I
ENSPFOG00000013459 Poecilia formosa ENSPFOG00000013459 I
ENSPFOG00000020694 Poecilia formosa ENSPFOG00000020694 N
ENSPMAG00000001574 Petromyzon marinus ENSPMAG00000001574 I
ENSPPYG00000008884 Pongo abelii ENSPPYG00000008884 I
ENSPPYG00000012923 Pongo abelii ENSPPYG00000012923 I
ENSPPYG00000017747 Pongo abelii ENSPPYG00000017747 I
ENSSHAG00000004124 Sarcophilus harrisii ENSSHAG00000004124 I
ENSSSCG00000029407 Sus scrofa ENSSSCG00000029407 I
ENSSTOG00000001607 Ictidomys tridecemlineatus ENSSTOG00000001607 I
ENSSTOG00000008099 Ictidomys tridecemlineatus ENSSTOG00000008099 I
ENSSTOG00000028058 Ictidomys tridecemlineatus ENSSTOG00000028058 I
ENSTGUG00000002679 Taeniopygia guttata ENSTGUG00000002679 I
ENSTRUG00000004645 Takifugu rubripes ENSTRUG00000004645 N
ENSXMAG00000000590 Xiphophorus maculatus ENSXMAG00000000590 I
ENSXMAG00000004924 Xiphophorus maculatus ENSXMAG00000004924 I
ENSXMAG00000005380 Xiphophorus maculatus ENSXMAG00000005380 I
ENSXMAG00000018112 Xiphophorus maculatus ENSXMAG00000018112 N
estExt_fgenesh2_pg.C_1190037 Branchiostoma floridae estExt_fgenesh2_pg.C_1190037 I
estExt_fgenesh2_pg.C_1190044 Branchiostoma floridae estExt_fgenesh2_pg.C_1190044 I
estExt_fgenesh2_pg.C_1190051 Branchiostoma floridae estExt_fgenesh2_pg.C_1190051 I
estExt_fgenesh2_pg.C_1190055 Branchiostoma floridae estExt_fgenesh2_pg.C_1190055 I
GA12282 Drosophila pseudoobscura FBgn0072328 I
GB48277 Apis mellifera GB48277 I
GE17808 Drosophila yakuba FBgn0235250 I
GF22533 Drosophila ananassae FBgn0099527 I
GG18323 Drosophila erecta FBgn0110539 I
GH11802 Drosophila grimshawi FBgn0119282 I
GI15983 Drosophila mojavensis FBgn0138732 I
GK25356 Drosophila willistoni FBgn0227315 I
GL16372 Drosophila persimilis FBgn0153976 I
GM11386 Drosophila sechellia FBgn0166329 I
HelroG126349 Helobdella robusta HelroG126349 I
HelroG136424 Helobdella robusta HelroG136424 I
HHAL010843-PA Halyomorpha halys HHAL010843-PA I
HMEL005340 Heliconius melpomene HMEL005340 I
ISCW023685 Ixodes scapularis ISCW023685 I
KGM_00011 Danaus plexippus KGM_00011 I
KGM_00012 Danaus plexippus KGM_00012 I
L798_09167 Zootermopsis nevadensis L798_09167 I
LCUP000151 Lucilia cuprina LCUP000151 I
LCUP010370 Lucilia cuprina LCUP010370 I
LDEC008343 Leptinotarsa decemlineata LDEC008343 I
LLOJ007007 Lutzomyia longipalpis LLOJ007007 I
LotgiG58417 Lottia gigantea LotgiG58417 I
LotgiG58476 Lottia gigantea LotgiG58476 I
MCINX013792 Melitaea cinxia MCINX013792 I
MCINX013793 Melitaea cinxia MCINX013793 I
MESCA000017 Megaselia scalaris MESCA000017 I
Myotis_brandtii_Sp5_10034946 Myotis brandtii Myotis_brandtii_Sp5_10034946 I
NEMVEDRAFT_v1g101900 Nematostella vectensis NEMVEDRAFT_v1g101900 I
NEMVEDRAFT_v1g28237 Nematostella vectensis NEMVEDRAFT_v1g28237 I
NEMVEDRAFT_v1g99612 Nematostella vectensis NEMVEDRAFT_v1g99612 I
nRc.2.0.1.g47400 Romanomermis culicivorax nRc.2.0.1.g47400 I
NV12527 Nasonia vitripennis NV12527 I
NV20053 Nasonia vitripennis NV20053 I
Ocbimv22023102m.g Octopus bimaculoides Ocbimv22023102m.g I
Ocbimv22028510m.g Octopus bimaculoides Ocbimv22028510m.g I
Ocbimv22028511m.g Octopus bimaculoides Ocbimv22028511m.g I
Ocbimv22028516m.g Octopus bimaculoides Ocbimv22028516m.g I
Ogr12594 Ophisaurus gracilis Ogr12594 I
PHUM453610 Pediculus humanus PHUM453610 I
PPAI004544 Phlebotomus papatasi PPAI004544 I
PPAI008544 Phlebotomus papatasi PPAI008544 I
Pvit_11839 Pogona vitticeps Pvit_11839 I
Pvit_13957 Pogona vitticeps Pvit_13957 I
PXEA_0001679901 Protopolystoma xenopodis PXEA_0001679901 I
RPRC004788 Rhodnius prolixus RPRC004788 I
Sakowv30026942m.g Saccoglossus kowalevskii Sakowv30026942m.g I
Sakowv30026949m.g Saccoglossus kowalevskii Sakowv30026949m.g I
SBAD_0000333501 Soboliphyme baturini SBAD_0000333501 I
SINV13577 Solenopsis invicta SINV13577 I
Sjc_0080330 Schistosoma japonicum Sjc_0080330 I
SMAR004861 Strigamia maritima SMAR004861 I
SMAR004952 Strigamia maritima SMAR004952 I
SMAR004954 Strigamia maritima SMAR004954 I
SMRZ_0001697001 Schistosoma margrebowiei SMRZ_0001697001 I
SMTD_0000672001 Schistosoma mattheei SMTD_0000672001 I
SMU15040248 Schmidtea mediterranea SMU15040248 I
SNAPOd2T00003145001 Oikopleura dioica SNAPOd2T00003145001 N
Sp1 Drosophila melanogaster FBgn0020378 D
SP3 Equus caballus ENSECAG00000013930 I
SP5 Anolis carolinensis ENSACAG00000016843 I
SP5 Bos taurus ENSBTAG00000003207 I
SP5 Canis familiaris ENSCAFG00000012550 I
SP5 Callithrix jacchus ENSCJAG00000006965 I
SP5 Felis catus ENSFCAG00000012078 I
SP5 Homo sapiens ENSG00000204335 D
SP5 Loxodonta africana ENSLAFG00000002720 I
SP5 Myotis lucifugus ENSMLUG00000028807 I
SP5 Macaca mulatta ENSMMUG00000002690 I
SP5 Monodelphis domestica ENSMODG00000008446 I
Sp5 Mus musculus ENSMUSG00000075304 D
SP5 Ornithorhynchus anatinus ENSOANG00000008556 I
SP5 Procavia capensis ENSPCAG00000017098 I
SP5 Pan troglodytes ENSPTRG00000029149 I
SP5 Pteropus vampyrus ENSPVAG00000006625 I
Sp5 Rattus norvegicus ENSRNOG00000054086 I
SP5 Tursiops truncatus ENSTTRG00000004531 I
sp5a Danio rerio ENSDARG00000076571 I
sp5a Gasterosteus aculeatus ENSGACG00000005058 I
sp5a Oryzias latipes ENSORLG00000017252 I
sp5a Tetraodon nigroviridis ENSTNIG00000016928 I
sp5a Takifugu rubripes ENSTRUG00000017816 I
SP6 Anolis carolinensis ENSACAG00000006831 I
SP6 Bos taurus ENSBTAG00000001825 I
SP6 Canis familiaris ENSCAFG00000016810 I
SP6 Callithrix jacchus ENSCJAG00000007740 I
SP6 Cavia porcellus ENSCPOG00000007638 I
SP6 Dasypus novemcinctus ENSDNOG00000042665 I
SP6 Equus caballus ENSECAG00000012853 I
SP6 Echinops telfairi ENSETEG00000017017 I
SP6 Felis catus ENSFCAG00000009363 I
SP6 Homo sapiens ENSG00000189120 I
SP6 Gorilla gorilla ENSGGOG00000004544 I
SP6 Loxodonta africana ENSLAFG00000010701 I
SP6 Macaca mulatta ENSMMUG00000003011 I
SP6 Monodelphis domestica ENSMODG00000012454 I
Sp6 Mus musculus ENSMUSG00000038560 I
SP6 Oryctolagus cuniculus ENSOCUG00000023482 I
SP6 Otolemur garnettii ENSOGAG00000030282 I
SP6 Ochotona princeps ENSOPRG00000004019 I
SP6 Pan troglodytes ENSPTRG00000009340 I
SP6 Pteropus vampyrus ENSPVAG00000004254 I
Sp6 Rattus norvegicus ENSRNOG00000023551 I
SP6 Sus scrofa ENSSSCG00000017522 I
SP6 Tursiops truncatus ENSTTRG00000012481 I
SP8 Bos taurus ENSBTAG00000002604 I
SP8 Callithrix jacchus ENSCJAG00000001245 I
SP8 Cavia porcellus ENSCPOG00000026910 I
SP8 Erinaceus europaeus ENSEEUG00000000621 I
SP8 Homo sapiens ENSG00000164651 D
SP8 Gasterosteus aculeatus ENSGACG00000006479 I
SP8 Macaca mulatta ENSMMUG00000003722 I
SP8 Monodelphis domestica ENSMODG00000001375 I
Sp8 Mus musculus ENSMUSG00000048562 I
SP8 Oryzias latipes ENSORLG00000003978 I
SP8 Pan troglodytes ENSPTRG00000018968 I
SP8 Pteropus vampyrus ENSPVAG00000005109 I
Sp8 Rattus norvegicus ENSRNOG00000005943 I
SP8 Tetraodon nigroviridis ENSTNIG00000002903 I
SP8 Takifugu rubripes ENSTRUG00000008153 I
SP8 Tursiops truncatus ENSTTRG00000013387 I
sp8.L Xenopus laevis XB-GENE-1216193 I
sp8a Danio rerio ENSDARG00000011870 I
sp8b Danio rerio ENSDARG00000056666 I
sp8b Gasterosteus aculeatus ENSGACG00000008062 I
sp8b Oryzias latipes ENSORLG00000007242 I
sp8b Tetraodon nigroviridis ENSTNIG00000018442 I
sp8b Takifugu rubripes ENSTRUG00000015810 I
SP9 Bos taurus ENSBTAG00000014949 I
sp9 Danio rerio ENSDARG00000099374 I
SP9 Dasypus novemcinctus ENSDNOG00000019150 I
SP9 Homo sapiens ENSG00000217236 D
SP9 Gasterosteus aculeatus ENSGACG00000004757 I
SP9 Gorilla gorilla ENSGGOG00000007345 I
SP9 Macaca mulatta ENSMMUG00000023005 I
SP9 Monodelphis domestica ENSMODG00000009303 I
Sp9 Mus musculus ENSMUSG00000068859 I
SP9 Otolemur garnettii ENSOGAG00000034062 I
SP9 Oryzias latipes ENSORLG00000017492 I
SP9 Procavia capensis ENSPCAG00000012721 I
Sp9 Rattus norvegicus ENSRNOG00000028187 I
SP9 Tetraodon nigroviridis ENSTNIG00000016949 I
SP9 Takifugu rubripes ENSTRUG00000017609 I
sp9 Xenopus tropicalis XB-GENE-5931012 I
SPU_011280 Strongylocentrotus purpuratus SPU_011280 I
SPU_016114 Strongylocentrotus purpuratus SPU_016114 I
SPU_024189 Strongylocentrotus purpuratus SPU_024189 I
SROB_0001082301 Schistosoma rodhaini SROB_0001082301 I
SSLN_0000264201 Schistocephalus solidus SSLN_0000264201 I
T265_02933 Opisthorchis viverrini T265_02933 I
TASK_0000640901 Taenia asiatica TASK_0000640901 I
TC011697 Tribolium castaneum TC011697 I
tetur22g00570 Tetranychus urticae tetur22g00570 I
TMUE_s0106000200 Trichuris muris TMUE_s0106000200 I
TRE_0000354701 Trichobilharzia regenti TRE_0000354701 I
TRE_0001792901 Trichobilharzia regenti TRE_0001792901 I
TriadG17488 Trichoplax adhaerens TriadG17488 I
TsM_000913800 Taenia solium TsM_000913800 I
TTAC_0000342701 Hydatigera taeniaeformis TTAC_0000342701 I
TTRE_0000693001 Trichuris trichiura TTRE_0000693001 I
XP_002933331 Xenopus tropicalis XP_002933331 I
XP_002933332 Xenopus tropicalis XP_002933332 I
XP_002933333 Xenopus tropicalis XP_002933333 I
XP_002938068 Xenopus tropicalis XP_002938068 I
YQE_04342 Dendroctonus ponderosae YQE_04342 I
zgc:77358 Gasterosteus aculeatus ENSGACG00000018154 N
zgc:77358 Tetraodon nigroviridis ENSTNIG00000014142 N