LjT10P12.70.nd (Lotus japonicus)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 LjT10P12.70.nd T357171_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY6
M07377_2.00 		Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG
CGTTGACYNDNDHNDNNNH		 Dap-seq
OMalley et al.(2016)
WRKY6_col_a 		0.885 0.864
WRKY6
M07378_2.00 		Arabidopsis thaliana
NNHNWRGTCAACKNH
DNMGTTGACYWNDNN		 Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a 		0.885 0.864
WRKY42
M07404_2.00 		Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN
NNDNNHNNNNHGTTGACYWHN		 Dap-seq
OMalley et al.(2016)
WRKY42_col_a 		0.875 0.831
WRKY42
M07405_2.00 		Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD
HHNDNMGTTGACYWNNNHND		 Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a 		0.875 0.831
WRKY31
M07408_2.00 		Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG
CGTTGACYHNNNNNDNNNN		 Dap-seq
OMalley et al.(2016)
WRKY31_col_a 		0.874 0.847
WRKY31
M07409_2.00 		Arabidopsis thaliana
NHWRGTCAACKNH
DNMGTTGACYWDN		 Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a 		0.874 0.847
WRKY47
M00732_2.00 		Arabidopsis thaliana
NNRGTCAACKN
NMGTTGACYNN		 PBM
Chang et al.(2013)
pTH7913 		0.871 0.814
WRKY47
M07402_2.00 		Arabidopsis thaliana
WRGTCAAMGNHVDK
MHBDNCKTTGACYW		 Dap-seq
OMalley et al.(2016)
WRKY47_col_a 		0.871 0.814
WRKY47
M07403_2.00 		Arabidopsis thaliana
NNNHWRGTCAACKNHNNNN
NNNNDNMGTTGACYWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY47_colamp_a 		0.871 0.814
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjT10P12.70.nd WRKY 127 185

Links

Other WRKY family TFs
Other Lotus japonicus TFs

648 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA018757 Oryza indica BGIOSGA018757 I
Bo4g006930 Brassica oleracea Bo4g006930 I
Bostr.25993s0083 Boechera stricta Bostr.25993s0083 I
Bra004503 Brassica rapa Bra004503 I
BRADI2G34670 Brachypodium distachyon BRADI2G34670 I
Cagra.0050s0017 Capsella grandiflora Cagra.0050s0017 I
Carubv10022831m.g Capsella rubella Carubv10022831m.g I
CCA1 Arabidopsis thaliana AT2G46830 D
CCA1 Arabidopsis lyrata scaffold_403655.1 I
EuGene.0400010070 Ostreococcus RCC809 EuGene.0400010070 I
e_gw1.06.00.251.1 Ostreococcus tauri e_gw1.06.00.251.1 N
F775_22448 Aegilops tauschii F775_22448 I
GRMZM2G170322 Zea mays GRMZM2G170322 I
GRMZM2G415077 Zea mays GRMZM2G415077 N
LPERR05G03900 Leersia perrieri LPERR05G03900 I
MLOC_5590 Hordeum vulgare MLOC_5590 I
OB05G14050 Oryza brachyantha OB05G14050 I
OBART05G04360 Oryza barthii OBART05G04360 I
OBART05G04370 Oryza barthii OBART05G04370 I
OGLUM05G04280 Oryza glumaepatula OGLUM05G04280 I
OMERI05G04320 Oryza meridionalis OMERI05G04320 I
ONIVA05G04710 Oryza nivara ONIVA05G04710 I
ORUFI05G04560 Oryza rufipogon ORUFI05G04560 I
OS05G0162800 Oryza sativa OS05G0162800 I
Pavir.J12412 Panicum virgatum Pavir.J12412 N
Sb01g012460 Sorghum bicolor Sb01g012460 I
Si038786m.g Setaria italica Si038786m.g I
Traes_1BS_24DBD38A8 Triticum aestivum Traes_1BS_24DBD38A8 I
TRIUR3_24634 Triticum urartu TRIUR3_24634 I