VDBG_01257 (Verticillium albo atrum)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 VDBG_01257 T357942_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nit-4
M01430_2.00 		Neurospora crassa
NTCCGCGGVN
NBCCGCGGAN		 PBM
Lambert et al.(2019)
pTH8909 		0.683 0.974
nirA
M01350_2.00 		Aspergillus nidulans
SYNCGGANNH
DNNTCCGNRS		 PBM
Lambert et al.(2019)
pEX0399 		0.629 0.923
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VDBG_01257T0 Zinc cluster 51 90

Links

Other Zinc cluster family TFs
Other Verticillium albo atrum TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M404DRAFT_703101 Pisolithus tinctorius M404DRAFT_703101 N 0.000
PAXRUDRAFT_135435 Paxillus rubicundulus PAXRUDRAFT_135435 N 0.000
PILCRDRAFT_147779 Piloderma croceum PILCRDRAFT_147779 N 0.000
SCLCIDRAFT_410861 Scleroderma citrinum SCLCIDRAFT_410861 N 0.000
SERLA73DRAFT_190204 Serpula lacrymans SERLA73DRAFT_190204 N 0.000