CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_03963
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_03963
T357988_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_03963T0
Zinc cluster
45
86
VACASCRERRIRCVVPKGDNECTQCKRSGTDCVIKNDDERRR
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O9_10082
Exophiala aquamarina
A1O9_10082
N
0.547
AB00088.1
Alternaria brassicicola
AB00088.1
N
0.653
ACRE_028580
Acremonium chrysogenum
ACRE_028580
N
0.611
CH063_03657
Colletotrichum higginsianum
CH063_03657
N
0.619
CHGG_09798
Chaetomium globosum
CHGG_09798
N
0.583
COCC4DRAFT_87358
Bipolaris maydis
COCC4DRAFT_87358
N
0.608
COCCADRAFT_90976
Bipolaris zeicola
COCCADRAFT_90976
N
0.608
COCMIDRAFT_81530
Bipolaris oryzae
COCMIDRAFT_81530
N
0.608
COCSADRAFT_105936
Bipolaris sorokiniana
COCSADRAFT_105936
N
0.608
COCVIDRAFT_32721
Bipolaris victoriae
COCVIDRAFT_32721
N
0.608
col-25
Neurospora crassa
NCU06068
N
0.595
CTHT_0017920
Chaetomium thermophilum
CTHT_0017920
N
0.591
F503_03119
Ophiostoma piceae uamh
F503_03119
N
0.653
FFUJ_01581
Fusarium fujikuroi
FFUJ_01581
N
0.611
fgenesh1_pg.sca_8_chr1_1_0000412
Nectria haematococca
fgenesh1_pg.sca_8_chr1_1_0000412
N
0.603
FGRRES_01378
Fusarium graminearum
FGRRES_01378
N
0.612
FPSE_11552
Fusarium pseudograminearum
FPSE_11552
N
0.612
gw1.2.32.1
Cochliobolus heterostrophus C5
gw1.2.32.1
N
0.608
HMPREF1624_07083
Sporothrix schenckii
HMPREF1624_07083
N
0.653
MYCFIDRAFT_158158
Pseudocercospora fijiensis
MYCFIDRAFT_158158
N
0.571
NechaG74381
Fusarium solani
NechaG74381
N
0.603
OIDMADRAFT_74239
Oidiodendron maius
OIDMADRAFT_74239
N
0.550
PFICI_13726
Pestalotiopsis fici
PFICI_13726
N
0.637
PODANS_5_4070
Podospora anserina
PODANS_5_4070
N
0.566
PTRG_10286
Pyrenophora triticirepentis
PTRG_10286
N
0.682
PTT_13765
Pyrenophora teres
PTT_13765
N
0.682
PV09_00164
Verruconis gallopava
PV09_00164
N
0.612
SETTUDRAFT_87447
Setosphaeria turcica
SETTUDRAFT_87447
N
0.608
SMAC_07447
Sordaria macrospora
SMAC_07447
N
0.595
SNOG_09876
Stagonospora nodorum
SNOG_09876
N
0.682
SPBR_06366
Sporothrix brasiliensis
SPBR_06366
N
0.653
VDAG_01189
Verticillium dahliae
VDAG_01189
N
0.683
VDBG_03963
Verticillium alfalfae
VDBG_03963
N
0.683