CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_04118
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_04118
T357989_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_04118T0
Zinc cluster
20
58
EACTFCRKRKIKCNNEQPTCANCRTYAKDCVYEPLTETN
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA025503
Oryza indica
BGIOSGA025503
N
OB07G17120
Oryza brachyantha
OB07G17120
N
OBART07G09860
Oryza barthii
OBART07G09860
N
OGLUM07G08890
Oryza glumaepatula
OGLUM07G08890
N
OMERI07G08390
Oryza meridionalis
OMERI07G08390
N
ONIVA11G15950
Oryza nivara
ONIVA11G15950
N
ORGLA07G0083400
Oryza glaberrima
ORGLA07G0083400
N
ORUFI07G09930
Oryza rufipogon
ORUFI07G09930
N