CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_04241
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_04241
T357991_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_04241T0
Zinc cluster
41
80
TGCHNCKHRRIKCDEKRPACTQCVRSRKECAGYPAPPRSA
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CHGG_02531
Chaetomium globosum
CHGG_02531
N
0.545
estExt_Genewise1.C_10650
Neurospora discreta
estExt_Genewise1.C_10650
N
0.562
e_gw1.1.204.1
Cryphonectria parasitica
e_gw1.1.204.1
N
0.539
F503_08318
Ophiostoma piceae uamh
F503_08318
N
0.588
FFUJ_02665
Fusarium fujikuroi
FFUJ_02665
N
0.554
FGRRES_16792
Fusarium graminearum
FGRRES_16792
N
0.554
FPSE_03206
Fusarium pseudograminearum
FPSE_03206
N
0.554
GGTG_00497
Gaeumannomyces graminis
GGTG_00497
N
0.539
MAC_08389
Metarhizium acridum
MAC_08389
N
0.579
MAJ_08802
Metarhizium majus
MAJ_08802
N
0.579
MAM_06358
Metarhizium album
MAM_06358
N
0.579
MANI_020316
Metarhizium anisopliae
MANI_020316
N
0.579
MBR_06175
Metarhizium brunneum
MBR_06175
N
0.579
MGU_09730
Metarhizium guizhouense
MGU_09730
N
0.579
NCU03728
Neurospora crassa
NCU03728
N
0.562
PFICI_11012
Pestalotiopsis fici
PFICI_11012
N
0.559
SMAC_02586
Sordaria macrospora
SMAC_02586
N
0.592
VDBG_04241
Verticillium alfalfae
VDBG_04241
N
0.683
X797_010394
Metarhizium robertsii
X797_010394
N
0.579