CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CGGC5_12972
(
Colletotrichum gloeosporioides
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CGGC5_12972
T363585_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
clr-2
M01429_2.00
Neurospora crassa
NNNNNCGGAR
YTCCGNNNNN
PBM
Lambert et al.(2019)
pTH11853
0.683
1.000
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ELA25990
Zinc cluster
48
87
HACAECKRRKIRCDGQQPCGQCLSSRAPKRCFYDKHRQRV
Links
Other
Zinc cluster
family TFs
Other
Colletotrichum gloeosporioides
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSPATT00006910001
Paramecium tetraurelia
GSPATT00006910001
I
GSPATT00007809001
Paramecium tetraurelia
GSPATT00007809001
I
GSPATT00013939001
Paramecium tetraurelia
GSPATT00013939001
I
GSPATT00017807001
Paramecium tetraurelia
GSPATT00017807001
I
GSPATT00017948001
Paramecium tetraurelia
GSPATT00017948001
I
GSPATT00018082001
Paramecium tetraurelia
GSPATT00018082001
D
GSPATT00020546001
Paramecium tetraurelia
GSPATT00020546001
I
GSPATT00022077001
Paramecium tetraurelia
GSPATT00022077001
I
GSPATT00027320001
Paramecium tetraurelia
GSPATT00027320001
I
GSPATT00028963001
Paramecium tetraurelia
GSPATT00028963001
I
GSPATT00031089001
Paramecium tetraurelia
GSPATT00031089001
I
GSPATT00032613001
Paramecium tetraurelia
GSPATT00032613001
N
GSPATT00033221001
Paramecium tetraurelia
GSPATT00033221001
I
GSPATT00038498001
Paramecium tetraurelia
GSPATT00038498001
N
GSPATT00039180001
Paramecium tetraurelia
GSPATT00039180001
I