CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CSUB01_07131
(
Colletotrichum sublineola
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CSUB01_07131
T365865_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
clr-2
M01429_2.00
Neurospora crassa
NNNNNCGGAR
YTCCGNNNNN
PBM
Lambert et al.(2019)
pTH11853
0.683
1.000
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KDN69204
Zinc cluster
48
87
HACAECKRRKIRCDGQQPCGQCLSSRAPKRCFYDKHRQRV
Links
Other
Zinc cluster
family TFs
Other
Colletotrichum sublineola
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PHSY_000891
Pseudozyma hubeiensis
PHSY_000891
N
PSEUBRA_SCAF3g03918
Pseudozyma brasiliensis
PSEUBRA_SCAF3g03918
N
sr10185
Sporisorium reilianum
sr10185
N