CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
F503_05241
(
Ophiostoma piceae uamh
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
F503_05241
T367113_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
clr-1
M02626_2.00
Neurospora crassa
NNNHTCCGGAWNN
NNWTCCGGADNNN
PBM
Weirauch et al.(2014)
pTH8805
0.683
0.974
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPE10146
Zinc cluster
148
185
IACEVCRSRKSRCDGTKPKCKLCTELGAECVYREPGIK
Links
Other
Zinc cluster
family TFs
Other
Ophiostoma piceae uamh
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R014038
Calypte anna
Aan_R014038
I
Afo_R007145
Aptenodytes forsteri
Afo_R007145
I