KAFR_0F01040 (Kazachstania africana)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 KAFR_0F01040 T371671_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GAL4
M01599_2.00
Saccharomyces cerevisiae
NYCGGVN

NBCCGRN
PBM
Zhu et al.(2009)
Gal4
0.606 0.769
GAL4
M07559_2.00
Saccharomyces cerevisiae
GGANVRCW

WGYBNTCC
ChIP-exo
Rhee et al.(2011)
Gal4_1
0.606 0.769
GAL4
M07560_2.00
Saccharomyces cerevisiae
GGRAAARGGTC

GACCYTTTYCC
ChIP-exo
Rhee et al.(2011)
Gal4_2
0.606 0.769
GAL4
M07561_2.00
Saccharomyces cerevisiae
AGAACAA

TTGTTCT
ChIP-exo
Rhee et al.(2011)
Gal4_3
0.606 0.769
GAL4
M08698_2.00
Saccharomyces cerevisiae
CGGVSNNVTNYNSNCCG

CGGNSNRNABNNSBCCG
Misc
DeBoer et al.(2011)
YPL248C_1510
0.606 0.769
GAL4
M11487_2.00
Saccharomyces cerevisiae
BYWCGGWSVAVWGHBVBCCGDDV

BHHCGGVBVDCWBTBSWCCGWRV
Transfac
Matys et al.(2006)
F$GAL4_01
0.606 0.769
GAL4
M11488_2.00
Saccharomyces cerevisiae
HKYWCGGHVVRVWGHBNBCCGD

HCGGVNVDCWBYBBDCCGWRMD
Transfac
Matys et al.(2006)
F$GAL4_C
0.606 0.769
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCF58700 Zinc cluster 3 41

Links

Other Zinc cluster family TFs
Other Kazachstania africana TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
LPERR04G05730 Leersia perrieri LPERR04G05730 N
OBART04G08380 Oryza barthii OBART04G08380 N
OGLUM04G08330 Oryza glumaepatula OGLUM04G08330 N
OLONG_016724 Oryza longistaminata OLONG_016724 N
OMERI04G07740 Oryza meridionalis OMERI04G07740 N
ONIVA04G06810 Oryza nivara ONIVA04G06810 N
OPUNC04G07000 Oryza punctata OPUNC04G07000 N
ORUFI04G09620 Oryza rufipogon ORUFI04G09620 N
RR29 Oryza indica BGIOSGA016167 N