CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KLLA0_F19602g
(
Kluyveromyces lactis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
KLLA0_F19602g
T371745_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CHA4
M00095_2.00
Saccharomyces cerevisiae
NRGCGGRGAN
NTCYCCGCYN
PBM
Badis et al.(2008)
CHA4_2113
0.547
0.615
CHA4
M01588_2.00
Saccharomyces cerevisiae
NNCGGVNNN
NNNBCCGNN
PBM
Zhu et al.(2009)
Cha4
0.547
0.615
CHA4
M07521_2.00
Saccharomyces cerevisiae
RGCGGRGW
WCYCCGCY
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0283.1
0.547
0.615
CHA4
M08678_2.00
Saccharomyces cerevisiae
VNNNVVGGCGGARWTNNHVNN
NNBDNNAWYTCCGCCBBNNNB
Misc
DeBoer et al.(2011)
YLR098C_844
0.547
0.615
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAG98668
Zinc cluster
15
54
LACQNCRIKRRKCDMERPCSNCLKYGIECITVNNDKRTKR
Links
Other
Zinc cluster
family TFs
Other
Kluyveromyces lactis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
E5Q_02905
Mixia osmundae
E5Q_02905
N
Ecym_2654
Eremothecium cymbalariae
Ecym_2654
N
K437DRAFT_229541
Tilletiaria anomala
K437DRAFT_229541
N
KAFR_0A01090
Kazachstania africana
KAFR_0A01090
N
KNAG_0H01180
Kazachstania naganishii
KNAG_0H01180
N
MELLADRAFT_105710
Melampsora laricipopulina
MELLADRAFT_105710
N
PAN0_007c3233
Pseudozyma antarctica
PAN0_007c3233
N
PFL1_04267
Pseudozyma flocculosa
PFL1_04267
N
PSEUBRA_SCAF3g03687
Pseudozyma brasiliensis
PSEUBRA_SCAF3g03687
N
sr10330
Sporisorium reilianum
sr10330
N
UHOR_01885
Ustilago hordei
UHOR_01885
N