CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LACBIDRAFT_302761
(
Laccaria bicolor
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
LACBIDRAFT_302761
T372091_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_67234
M01419_2.00
Schizophyllum commune
BATCGGAV
BTCCGATV
PBM
Lambert et al.(2019)
pTH9776
0.683
0.971
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDR05637
Zinc cluster
31
67
LSCAECRRLKLRCDRAVPCSSCVKRGCGAICPDGSLT
Links
Other
Zinc cluster
family TFs
Other
Laccaria bicolor
TFs
137 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_143370
Bipolaris maydis
COCC4DRAFT_143370
N
COCCADRAFT_90712
Bipolaris zeicola
COCCADRAFT_90712
N
COCMIDRAFT_83310
Bipolaris oryzae
COCMIDRAFT_83310
N
COCSADRAFT_116463
Bipolaris sorokiniana
COCSADRAFT_116463
N
V565_163360
Rhizoctonia solani
V565_163360
N