CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MPH_10353
(
Macrophomina phaseolina
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
MPH_10353
T374936_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
vad-5
M02619_2.00
Neurospora crassa
NNNHCGDNNN
NNNHCGDNNN
PBM
Weirauch et al.(2014)
pTH8350
0.564
0.828
vad-5
M02620_2.00
Neurospora crassa
NNYCGGNWN
NWNCCGRNN
PBM
Weirauch et al.(2014)
pTH8902
0.564
0.828
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EKG12483
Zinc cluster
130
160
PSCDACRERKVKCDATETSSCSECSSRSETN
Links
Other
Zinc cluster
family TFs
Other
Macrophomina phaseolina
TFs
102 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy