CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PAS_chr3_0407
(
Komagataella pastoris
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PAS_chr3_0407
T376927_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAY70456
Zinc cluster
19
57
KACDYCRSKKVRCDGEQPCNNCISCKTSCTYNHVKKRRT
Links
Other
Zinc cluster
family TFs
Other
Komagataella pastoris
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA006275
Oryza indica
BGIOSGA006275
N
OB02G27720
Oryza brachyantha
OB02G27720
N
OBART02G20160
Oryza barthii
OBART02G20160
N
OGLUM02G20470
Oryza glumaepatula
OGLUM02G20470
N
OLONG_002407
Oryza longistaminata
OLONG_002407
N
OMERI02G19950
Oryza meridionalis
OMERI02G19950
N
ONIVA02G22270
Oryza nivara
ONIVA02G22270
N
OPUNC02G18090
Oryza punctata
OPUNC02G18090
N
ORGLA02G0172900
Oryza glaberrima
ORGLA02G0172900
N
ORUFI02G21290
Oryza rufipogon
ORUFI02G21290
N