CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PCH_Pc22g08580
(
Penicillium rubens
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PCH_Pc22g08580
T377314_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
aod-5
M02602_2.00
Neurospora crassa
NNCGGRDNNN
NNNHYCCGNN
PBM
Weirauch et al.(2014)
pTH8816
0.612
0.923
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAP98146
Zinc cluster
63
103
RACFACQRAHLTCGDERPCQRCIKRGLQDACHDGVRKKAKY
Links
Other
Zinc cluster
family TFs
Other
Penicillium rubens
TFs
113 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G303463
Zea mays
GRMZM2G303463
I
0.000
GSMUA_Achr1G08130_001
Musa acuminata
GSMUA_Achr1G08130_001
N
0.000