CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PFICI_06028
(
Pestalotiopsis fici
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PFICI_06028
T377938_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ff-7
M02603_2.00
Neurospora crassa
VGCGSNN
NNSCGCB
PBM
Weirauch et al.(2014)
pTH8817
0.559
0.725
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETS81026
Zinc cluster
225
264
TGCLTCRKRKKKCDELKPECNNCIRGGFICQGYPNQRGYQ
Links
Other
Zinc cluster
family TFs
Other
Pestalotiopsis fici
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TVAG_146880
Trichomonas vaginalis
TVAG_146880
N
TVAG_196950
Trichomonas vaginalis
TVAG_196950
N
TVAG_245700
Trichomonas vaginalis
TVAG_245700
N
TVAG_365790
Trichomonas vaginalis
TVAG_365790
N