CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PHLGIDRAFT_108161
(
Phlebiopsis gigantea
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PHLGIDRAFT_108161
T378366_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_67234
M01419_2.00
Schizophyllum commune
BATCGGAV
BTCCGATV
PBM
Lambert et al.(2019)
pTH9776
0.605
0.806
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIP05474
Zinc cluster
20
57
LSCAECRRLKLRCSRVFPCASCVKKGCAAICPDGSLTT
Links
Other
Zinc cluster
family TFs
Other
Phlebiopsis gigantea
TFs
77 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA13G41210
Glycine max
GLYMA13G41210
I
Gorai.003G130700
Gossypium raimondii
Gorai.003G130700
I
Gorai.006G172000
Gossypium raimondii
Gorai.006G172000
I
Gorai.009G098300
Gossypium raimondii
Gorai.009G098300
I
MDP0000119092
Malus domestica
MDP0000119092
N
MDP0000138764
Malus domestica
MDP0000138764
N
MDP0000222004
Malus domestica
MDP0000222004
N
PDK_20s1300944g001
Phoenix dactylifera
PDK_20s1300944g001
N
PDK_20s1590481g002
Phoenix dactylifera
PDK_20s1590481g002
N
SapurV1A.0040s0420
Salix purpurea
SapurV1A.0040s0420
I
SapurV1A.0041s0150
Salix purpurea
SapurV1A.0041s0150
I
Si034524m.g
Setaria italica
Si034524m.g
I