PICST_60934 (Scheffersomyces stipitis)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 PICST_60934 T378569_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LEU3
M01590_2.00 		Saccharomyces cerevisiae
NNCGGNNNN
NNNNCCGNN		 PBM
Zhu et al.(2009)
Leu3 		0.552 0.650
LEU3
M07526_2.00 		Saccharomyces cerevisiae
CCKDHDSCGS
SCGSHDHMGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0324.1 		0.552 0.650
LEU3
M08684_2.00 		Saccharomyces cerevisiae
SCKNNNNMGS
SCKNNNNMGS		 Misc
DeBoer et al.(2011)
YLR451W_781 		0.552 0.650
LEU3
M11482_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$LEU3_B 		0.552 0.650
LEU3
M11483_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$LEU3_Q6 		0.552 0.650
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ABN67105 Zinc cluster 48 90

Links

Other Zinc cluster family TFs
Other Scheffersomyces stipitis TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
15147_YLR451W Saccharomyces paradoxus 15147_YLR451W I 0.552
15505_Multiple Saccharomyces mikatae 15505_Multiple I 0.552
17250_YLR451W Saccharomyces bayanus 17250_YLR451W I 0.552
BN7_4573 Wickerhamomyces ciferrii BN7_4573 I 0.575
CAGL0H00396g Candida glabrata CAGL0H00396g I 0.552
CANTEDRAFT_103499 Candida tenuis CANTEDRAFT_103499 I 0.603
CaO19.11700 Candida albicans CaO19.11700 I 0.575
CaO19.4225 Candida albicans CaO19.4225 I 0.575
CD36_52000 Candida dubliniensis CD36_52000 I 0.575
CORT_0B02970 Candida orthopsilosis CORT_0B02970 I 0.606
CPAG_00528 Candida parapsilosis CPAG_00528 I 0.606
CTRG_03202 Candida tropicalis CTRG_03202 I 0.588
DEHA2E10120g Debaryomyces hansenii DEHA2E10120g I 0.559
Ecym_7203 Eremothecium cymbalariae Ecym_7203 I 0.552
e_gww1.5.1.126.1 Pichia stipitis e_gww1.5.1.126.1 I 0.683
G210_1528 Candida maltosa G210_1528 I 0.588
GNLVRS01_PISO0K11296g Millerozyma farinosa GNLVRS01_PISO0K11296g I 0.576
GNLVRS01_PISO0L11297g Millerozyma farinosa GNLVRS01_PISO0L11297g I 0.576
HPODL_00249 Ogataea parapolymorpha HPODL_00249 I 0.582
KLTH0F18392g Kluyveromyces thermotolerans KLTH0F18392g I 0.552
KLTH0F18392g Lachancea thermotolerans KLTH0F18392g I 0.552
KNAG_0D05240 Kazachstania naganishii KNAG_0D05240 I 0.542
Kpol_1008p13 Vanderwaltozyma polyspora Kpol_1008p13 I 0.552
Kwal_21884 Kluyveromyces waltii Kwal_21884 I 0.552
LALA0_S01e18382g Lachancea lanzarotensis LALA0_S01e18382g I 0.552
LELG_03934 Lodderomyces elongisporus LELG_03934 I 0.575
LEU3 Saccharomyces cerevisiae YLR451W D 0.552
NCAS_0H00270 Naumovozyma castellii NCAS_0H00270 I 0.552
NDAI_0D00220 Naumovozyma dairenensis NDAI_0D00220 I 0.552
PAS_chr3_0759 Komagataella pastoris PAS_chr3_0759 N 0.597
SAKL0F15444g Lachancea kluyveri SAKL0F15444g I 0.549
Scas_Contig691.32 Saccharomyces castellii Scas_Contig691.32 I 0.552
SPAPADRAFT_152650 Spathaspora passalidarum SPAPADRAFT_152650 I 0.606
SU7_2407 Saccharomyces arboricola SU7_2407 I 0.552
TBLA_0F02920 Tetrapisispora blattae TBLA_0F02920 I 0.552
TDEL_0H00590 Torulaspora delbrueckii TDEL_0H00590 I 0.552
TPHA_0G00380 Tetrapisispora phaffii TPHA_0G00380 I 0.552
XP_002492988.1 Pichia pastoris XP_002492988.1 N 0.597
ZBAI_01033 Zygosaccharomyces bailii ZBAI_01033 I 0.552
ZBAI_07505 Zygosaccharomyces bailii ZBAI_07505 I 0.552
ZYRO0D01650g Zygosaccharomyces rouxii ZYRO0D01650g I 0.552