CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SERLA73DRAFT_110825
(
Serpula lacrymans
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
SERLA73DRAFT_110825
T383638_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_67234
M01419_2.00
Schizophyllum commune
BATCGGAV
BTCCGATV
PBM
Lambert et al.(2019)
pTH9776
0.643
0.848
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGN97559
Zinc cluster
24
58
LSCAECRRLKLRCSRVFPCSNCVKRGCSAICPEGS
Links
Other
Zinc cluster
family TFs
Other
Serpula lacrymans
TFs
93 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI1G32950
Brachypodium distachyon
BRADI1G32950
N
BRADI2G27040
Brachypodium distachyon
BRADI2G27040
N
MLOC_43923
Hordeum vulgare
MLOC_43923
N
Traes_1BL_A75EDBFD9
Triticum aestivum
Traes_1BL_A75EDBFD9
N
Traes_2DL_01DEC201E
Triticum aestivum
Traes_2DL_01DEC201E
N
Traes_3AL_29AD9D378
Triticum aestivum
Traes_3AL_29AD9D378
N
Traes_3DL_80E8CBB73
Triticum aestivum
Traes_3DL_80E8CBB73
N
Traes_5BL_B569B5FF4
Triticum aestivum
Traes_5BL_B569B5FF4
N
Traes_6DL_9097A97D9
Triticum aestivum
Traes_6DL_9097A97D9
N
Traes_7AS_DE61FE07F
Triticum aestivum
Traes_7AS_DE61FE07F
N
Traes_7DS_EB10DBA07
Triticum aestivum
Traes_7DS_EB10DBA07
N
TRIUR3_06404
Triticum urartu
TRIUR3_06404
N
TRIUR3_13794
Triticum urartu
TRIUR3_13794
N
TRIUR3_17083
Triticum urartu
TRIUR3_17083
N