CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPBR_05511
(
Sporothrix brasiliensis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
SPBR_05511
T384314_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
col-22
M01424_2.00
Neurospora crassa
NNNSBCCGGVVN
NBBCCGGVSNNN
PBM
Lambert et al.(2019)
pTH8929
0.683
0.949
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIH93959
Zinc cluster
73
111
HSCVLCQQRKVRCDKNKPCANCVKAQVECRVVPPQPPRR
Links
Other
Zinc cluster
family TFs
Other
Sporothrix brasiliensis
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OLONG_021440
Oryza longistaminata
OLONG_021440
N
ORGLA03G0090000
Oryza glaberrima
ORGLA03G0090000
N
ORGLA06G0284700
Oryza glaberrima
ORGLA06G0284700
N