RGT1 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YKL038W T388357_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RGT1
M00092_2.00		 Saccharomyces cerevisiae
CGGRDNWWHN
NDWWNHYCCG		 PBM
Badis et al.(2008)
RGT1_2131		 (Direct) (Direct)
RGT1
M01585_2.00		 Saccharomyces cerevisiae
HCGGADNWWN
NWWNHTCCGD		 PBM
Zhu et al.(2009)
Rgt1		 (Direct) (Direct)
RGT1
M07518_2.00		 Saccharomyces cerevisiae
NCGGADNAWHN
NDWTNHTCCGN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0367.1		 (Direct) (Direct)
RGT1
M08673_2.00		 Saccharomyces cerevisiae
NDNNNYCGGAWWAAYHNNNN
NNNNDRTTWWTCCGRNNNHN		 Misc
DeBoer et al.(2011)
YKL038W_803		 (Direct) (Direct)
RGT1
M11480_2.00		 Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RGT1_Q5		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00092_2.00 Zinc cluster 44 85
M01585_2.00 Zinc cluster 45 86

DNA Binding Domains

Protein ID Domain From To Sequence
YKL038W Zinc cluster 45 86

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP11445 Atta cephalotes ACEP11445 N 0.000
Bm9570 Brugia malayi Bm9570 N 0.000
Cflo_10839--XP_001121050.1_APIME Camponotus floridanus Cflo_10839--XP_001121050.1_APIME N 0.000
EEL_0000450601 Elaeophora elaphi EEL_0000450601 N 0.000
LOAG_01844 Loa loa LOAG_01844 N 0.000
nAv.1.0.1.g08358 Acanthocheilonema viteae nAv.1.0.1.g08358 N 0.000
nLs.2.1.2.g01927 Litomosoides sigmodontis nLs.2.1.2.g01927 N 0.000
nOo.2.0.1.g00726 Onchocerca ochengi nOo.2.0.1.g00726 N 0.000
OFLC_0001331201 Onchocerca flexuosa OFLC_0001331201 N 0.000
SINV12288 Solenopsis invicta SINV12288 N 0.000
TCLT_0000513201 Thelazia callipaeda TCLT_0000513201 N 0.000
WBGene00239724 Onchocerca volvulus WBGene00239724 N 0.000
WUBG_01872 Wuchereria bancrofti WUBG_01872 N 0.000