e_gww1.1.1.1491.1 (Pichia stipitis)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 e_gww1.1.1.1491.1 T389538_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARG81
M08441_2.00 		Saccharomyces cerevisiae
DTGACTCH
DGAGTCAH		 ChIP-chip
Mathelier et al.(2014)
MA0272.1 		0.569 0.775
ARG81
M08685_2.00 		Saccharomyces cerevisiae
CGGYVKCGG
CCGMBRCCG		 Misc
DeBoer et al.(2011)
YML099C_1506 		0.569 0.775
ARG81
M11484_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ARGRII_01 		0.569 0.775
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gww1.1.1.1491.1 Zinc cluster 9 48

Links

Other Zinc cluster family TFs
Other Pichia stipitis TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
16040_YML099C Saccharomyces mikatae 16040_YML099C I 0.569
17710_YML099C Saccharomyces paradoxus 17710_YML099C I 0.569
18194_YML099C Saccharomyces bayanus 18194_YML099C I 0.570
AACERI_AaceriAAL175W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL175W I 0.598
AGOS_AAL175W Ashbya gossypii AGOS_AAL175W I 0.598
ARG81 Saccharomyces cerevisiae YML099C D 0.569
CaO19.10262 Candida albicans CaO19.10262 I 0.556
CaO19.2748 Candida albicans CaO19.2748 I 0.556
CD36_42420 Candida dubliniensis CD36_42420 I 0.556
CORT_0E00270 Candida orthopsilosis CORT_0E00270 I 0.544
CPAG_00315 Candida parapsilosis CPAG_00315 I 0.561
CTRG_00138 Candida tropicalis CTRG_00138 I 0.558
DEHA2E16302g Debaryomyces hansenii DEHA2E16302g I 0.589
Ecym_8159 Eremothecium cymbalariae Ecym_8159 I 0.577
G210_1017 Candida maltosa G210_1017 I 0.556
GNLVRS01_PISO0M20692g Millerozyma farinosa GNLVRS01_PISO0M20692g I 0.592
GNLVRS01_PISO0N20935g Millerozyma farinosa GNLVRS01_PISO0N20935g I 0.592
KAFR_0L02130 Kazachstania africana KAFR_0L02130 I 0.552
KLLA0_D10197g Kluyveromyces lactis KLLA0_D10197g I 0.565
KLTH0E16500g Lachancea thermotolerans KLTH0E16500g I 0.544
KLTH0E16500g Kluyveromyces thermotolerans KLTH0E16500g I 0.544
KNAG_0J00210 Kazachstania naganishii KNAG_0J00210 I 0.570
Kpol_538p52 Vanderwaltozyma polyspora Kpol_538p52 I 0.570
Kwal_9688 Kluyveromyces waltii Kwal_9688 I 0.577
LALA0_S01e00826g Lachancea lanzarotensis LALA0_S01e00826g I 0.549
LELG_04177 Lodderomyces elongisporus LELG_04177 I 0.603
NCAS_0C00220 Naumovozyma castellii NCAS_0C00220 I 0.545
NDAI_0K00150 Naumovozyma dairenensis NDAI_0K00150 I 0.560
PGUG_03209 Candida guilliermondii PGUG_03209 I 0.570
PGUG_03209 Meyerozyma guilliermondii PGUG_03209 I 0.570
PICST_51603 Scheffersomyces stipitis PICST_51603 I 0.683
SAKL0D00264g Lachancea kluyveri SAKL0D00264g I 0.552
Scas_Contig626.6 Saccharomyces castellii Scas_Contig626.6 I 0.545
SKUD_195006 Saccharomyces kudriavzevii SKUD_195006 I 0.569
SPAPADRAFT_69629 Spathaspora passalidarum SPAPADRAFT_69629 I 0.559
SU7_2431 Saccharomyces arboricola SU7_2431 I 0.569
TDEL_0B00480 Torulaspora delbrueckii TDEL_0B00480 I 0.607
TRIATDRAFT_141953 Trichoderma atroviride TRIATDRAFT_141953 I 0.539
YALI0_D09647g Yarrowia lipolytica YALI0_D09647g I 0.547
ZBAI_03002 Zygosaccharomyces bailii ZBAI_03002 I 0.570
ZBAI_08687 Zygosaccharomyces bailii ZBAI_08687 I 0.570
ZYRO0A00440g Zygosaccharomyces rouxii ZYRO0A00440g I 0.570