CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1.C_170304
(
Cochliobolus heterostrophus C5
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_Genewise1.C_170304
T389810_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_170304
Zinc cluster
59
97
VSCETCKQRKVKCDRASPACSWCLKNHSACVYLPRKKPG
Links
Other
Zinc cluster
family TFs
Other
Cochliobolus heterostrophus C5
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cob_08539
Colletotrichum orbiculare
Cob_08539
N
0.553
COCC4DRAFT_141737
Bipolaris maydis
COCC4DRAFT_141737
N
0.683
COCCADRAFT_105218
Bipolaris zeicola
COCCADRAFT_105218
N
0.683
COCMIDRAFT_24334
Bipolaris oryzae
COCMIDRAFT_24334
N
0.683
COCSADRAFT_184965
Bipolaris sorokiniana
COCSADRAFT_184965
N
0.654
COCVIDRAFT_40964
Bipolaris victoriae
COCVIDRAFT_40964
N
0.683
estExt_Genewise1Plus.C_sca_31_chr3_5_00235
Nectria haematococca
estExt_Genewise1Plus.C_sca_31_chr3_5_00235
N
0.556
FFUJ_10935
Fusarium fujikuroi
FFUJ_10935
N
0.556
FOXG_09999
Fusarium oxysporum
FOXG_09999
N
0.556
FVEG_08515
Fusarium verticillioides
FVEG_08515
N
0.556
LEMA_P093350.1
Leptosphaeria maculans
LEMA_P093350.1
N
0.658
NechaG67867
Fusarium solani
NechaG67867
N
0.556
PTRG_04631
Pyrenophora triticirepentis
PTRG_04631
N
0.682
PV09_06338
Verruconis gallopava
PV09_06338
I
0.561