fgenesh1_pg.sca_82_chr10_2_0000101 (Nectria haematococca)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 fgenesh1_pg.sca_82_chr10_2_0000101 T390283_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.sca_82_chr10_2_0000101 Zinc cluster 20 59

Links

Other Zinc cluster family TFs
Other Nectria haematococca TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC203957.3_FG004 Zea mays AC203957.3_FG004 N
BGIOSGA028522 Oryza indica BGIOSGA028522 N
BGIOSGA040512 Oryza indica BGIOSGA040512 N
BRADI3G22040 Brachypodium distachyon BRADI3G22040 N
BRADI4G27720 Brachypodium distachyon BRADI4G27720 N
F775_14757 Aegilops tauschii F775_14757 N
GRMZM2G092137 Zea mays GRMZM2G092137 N
LPERR08G10100 Leersia perrieri LPERR08G10100 N
LPERR09G03320 Leersia perrieri LPERR09G03320 N
MLOC_71104 Hordeum vulgare MLOC_71104 N
OB08G20490 Oryza brachyantha OB08G20490 N
OB09G13080 Oryza brachyantha OB09G13080 N
OBART08G12060 Oryza barthii OBART08G12060 N
OBART09G04710 Oryza barthii OBART09G04710 N
OGLUM08G12880 Oryza glumaepatula OGLUM08G12880 N
OGLUM09G05500 Oryza glumaepatula OGLUM09G05500 N
OLONG_017657 Oryza longistaminata OLONG_017657 N
OLONG_022621 Oryza longistaminata OLONG_022621 N
OMERI08G10040 Oryza meridionalis OMERI08G10040 N
OMERI09G03860 Oryza meridionalis OMERI09G03860 N
ONIVA08G12360 Oryza nivara ONIVA08G12360 N
OPUNC08G10970 Oryza punctata OPUNC08G10970 N
OPUNC09G04190 Oryza punctata OPUNC09G04190 N
ORGLA03G0189000 Oryza glaberrima ORGLA03G0189000 N
ORGLA08G0106400 Oryza glaberrima ORGLA08G0106400 N
ORUFI08G13590 Oryza rufipogon ORUFI08G13590 N
ORUFI09G05300 Oryza rufipogon ORUFI09G05300 N
OS09G0306400 Oryza sativa OS09G0306400 N
Pavir.Ba02250 Panicum virgatum Pavir.Ba02250 N
Pavir.Bb01636 Panicum virgatum Pavir.Bb01636 N
Sb02g020760 Sorghum bicolor Sb02g020760 N
Si031353m.g Setaria italica Si031353m.g N
Traes_5AL_D9A4DFF71 Triticum aestivum Traes_5AL_D9A4DFF71 N
Traes_5DL_67A38E9B7 Triticum aestivum Traes_5DL_67A38E9B7 N
TRIUR3_05083 Triticum urartu TRIUR3_05083 N